RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 OR10G4Q8NGN3 311 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 OR10G9Q8NGN4 311 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 OR10G7Q8NGN6 311 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 TMED6Q8WW62 240 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 C14orf79Q96F83 325 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 URGCP-MRPS24S4R325 110 aa11.76□□□□□ -0.53
PDGFRB-201ENST00000261799 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 PTP4A3O75365 173 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 GNLYP22749 145 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 FABP9Q0Z7S8 132 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 SDK1Q7Z5N4 2213 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 MYO16Q9Y6X6 1858 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 VDAC2P45880 294 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 GZMKP49863 264 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 ARL2-SNX15V9GYD0 113 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 GABRB1P18505 474 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 SURF2Q15527 256 aaPredicted RBP11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 OR5H6Q8NGV6 325 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 PKIBQ9C010 78 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEM106BQ9NUM4 274 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 FRRS1LQ9P0K9 344 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 OR2H2O95918 312 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 HLA-GP17693 338 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 LINC00303Q3SY05 128 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 VWA1Q6PCB0 445 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 PPP1R1CQ8WVI7 109 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 CD37P11049 281 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 RPL35P42766 123 aaKnown RBP11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 TIAL1Q01085 375 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 SLC25A47Q6Q0C1 308 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 CCL28Q9NRJ3 127 aa11.75□□□□□ -0.53
PDGFRB-201ENST00000261799 TRIP11Q15643 1979 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 J3QW42 95 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 KCNAB3O43448 404 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 TGOLN2O43493 480 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 BCL2L11O43521 198 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 OR52B4Q8NGK2 314 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 OR5C1Q8NGR4 320 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 SMCHD1A6NHR9 2005 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 TRAV30A0A087WSZ9 112 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 FFAR1O14842 300 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 HBZP02008 142 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 EIF4EBP2Q13542 120 aaPredicted RBP11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 ANKRD55Q3KP44 614 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 LINC00470Q9BZP3 86 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 C19orf35Q6ZS72 473 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 RTN4RL2Q86UN3 420 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 EIF4E3Q8N5X7 224 aaKnown RBP11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 A0A1B0GU03 582 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF729A6NN14 1252 aaPredicted RBP11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 RECKO95980 971 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 ASAH2BP0C7U1 165 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF137PP52743 207 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 FGF12P61328 243 aa11.74□□□□□ -0.53
PDGFRB-201ENST00000261799 SBF2Q86WG5 1849 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 SYNGR2O43760 224 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 TSPOP30536 169 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 MFAP4P55083 255 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 OR10AC1Q8NH08 325 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 MS4A10Q96PG2 267 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 IGSF23A1L1A6 192 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 NPIPB8E9PQR5 432 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 OR2A4O95047 310 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 PPYP01298 95 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 CDKN1AP38936 164 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 IL24Q13007 206 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 CYB5R2Q6BCY4 276 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF66Q6ZN08 573 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 C11orf42Q8N5U0 333 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 OR8D4Q8NGM9 314 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 TMEM186Q96B77 213 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 SNRNP40Q96DI7 357 aaKnown RBP11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 EAF1Q96JC9 268 aaPredicted RBP11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 NOL4LQ96MY1 436 aaPredicted RBP11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 OR2A7Q96R45 310 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 CALYQ9NYX4 217 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 NPY1RP25929 384 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 FAM219BQ5XKK7 198 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 Q9N2K0 584 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 MSRB2Q9Y3D2 182 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 C9orf170A2RU37 121 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 SNRPD3P62318 126 aaKnown RBP11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF385DQ9H6B1 395 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 PYCARD-AS1I3L0S3 204 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 SOCS1O15524 211 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 OGG1O15527 345 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 CRXO43186 299 aaPredicted RBP11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 ADAM11O75078 769 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 DEDDO75618 318 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 THY1P04216 161 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 GLRXP35754 106 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 PPOXP50336 477 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 NUTF2P61970 127 aaKnown RBP11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 LINC00299Q6ZSB3 139 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 ZNF826PQ6ZT77 177 aa11.73□□□□□ -0.53
PDGFRB-201ENST00000261799 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms