RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 COPEO14579 308 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TAAR5O14804 337 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 FAM189A1O60320 539 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 CNMDO75829 334 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 SNAPC5O75971 98 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 SLC25A27O95847 323 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 PAEPP09466 180 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR56A5P0C7T3 313 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR13C7P0DN81 318 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 CD37P11049 281 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 CASP1P29466 404 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 GPM6AP51674 278 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 SUB1P53999 127 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TCL1AP56279 114 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 CLDN12P56749 244 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR12D2P58182 307 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TAS2R43P59537 309 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TIMM10P62072 90 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 PPP1CBP62140 327 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 BAXQ07812 192 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 FAM53BQ14153 422 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 NRF1Q16656 503 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 HIST3H3Q16695 136 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 CLEC12BQ2HXU8 276 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 HENMT1Q5T8I9 393 aaKnown RBP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 GLYATQ6IB77 296 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TOMM20LQ6UXN7 152 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 CASP12Q6UXS9 341 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 BLIDQ8IZY5 108 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 DCAF4L2Q8NA75 395 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF439Q8NDP4 499 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ST6GALNAC3Q8NDV1 305 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR8G5Q8NG78 346 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 GPR32P1Q8NGA4 272 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR4E2Q8NGC2 313 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR5AR1Q8NGP9 310 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR51Q1Q8NH59 317 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR13C6PQ8NH95 151 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF420Q8TAQ5 688 aaPredicted RBP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 HAVCR2Q8TDQ0 301 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 GNPDA2Q8TDQ7 276 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 DCAKDQ8WVC6 231 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 EEF1AKMT1Q8WVE0 214 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ASB13Q8WXK3 278 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ACOT12Q8WYK0 555 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 FGF14Q92915 247 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 IL22RA2Q969J5 263 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 EEF1AKMT3Q96AZ1 226 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ROPN1LQ96C74 230 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 DNAJC19Q96DA6 116 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 PIK3IP1Q96FE7 263 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 REEP6Q96HR9 211 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 TBX5Q99593 518 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 NRTNQ99748 197 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 NRIP2Q9BQI9 281 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 SULT4A1Q9BR01 284 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OR11A1Q9GZK7 315 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 POLR2J2Q9GZM3 115 aaKnown RBP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 POLR2J3Q9H1A7 115 aaKnown RBP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 Q9H521 79 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF442Q9H7R0 627 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 C14orf105Q9NVL8 296 aa2.92□□□□□ -1.94
CCDC54-201ENST00000261058 MTCL1Q9Y4B5 1905 aaKnown RBP2.92□□□□□ -1.94
CCDC54-201ENST00000261058 OVOS2A0A0J9YW53 1432 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 OVOS2Q6IE36 1432 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 WNK3Q9BYP7 1800 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 A0A1W2PP64 1363 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 AKAP12Q02952 1782 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 CDC42BPBQ9Y5S2 1711 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 DENND4AQ7Z401 1863 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 TCOF1Q13428 1488 aaKnown RBP2.91□□□□□ -1.94
CCDC54-201ENST00000261058 FANCD2Q9BXW9 1451 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 CEP164Q9UPV0 1460 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 FAM166BA8MTA8 275 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 C1orf196B1AJZ1 125 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 F5H5K5 113 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 TNFRSF11BO00300 401 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 ENSAO43768 121 aaKnown RBP2.91□□□□□ -1.94
CCDC54-201ENST00000261058 CA11O75493 328 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 IFNA7P01567 189 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 MRPL3P09001 348 aaKnown RBP2.91□□□□□ -1.94
CCDC54-201ENST00000261058 IL7P13232 177 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 RAB3BP20337 219 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 USF1P22415 310 aaPredicted RBP2.91□□□□□ -1.94
CCDC54-201ENST00000261058 UBE2E1P51965 193 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 RAB38P57729 211 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 TPI1P60174 286 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 SELENOWP63302 87 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 ZNF92Q03936 586 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 INCA1Q0VD86 236 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 OR2F1Q13607 317 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 CLINT1Q14677 625 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 SHHQ15465 462 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 TFDP3Q5H9I0 405 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 NCMAPQ5T1S8 102 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 AKR1C8PQ5T2L2 129 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 HIST2H3PS2Q5TEC6 136 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 DCUN1D2Q6PH85 259 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 GLT6D1Q7Z4J2 308 aa2.91□□□□□ -1.94
CCDC54-201ENST00000261058 DEFB128Q7Z7B8 93 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms