RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 Q6ZN92 141 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 NPAS1Q99742 590 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 CEBPDP49716 269 aaPredicted RBP10.55□□□□□ -0.72
COL8A1-201ENST00000261037 EIF4E3Q8N5X7 224 aaKnown RBP10.55□□□□□ -0.72
COL8A1-201ENST00000261037 OR2D3Q8NGH3 330 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 OR2T10Q8NGZ9 312 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 RNF133Q8WVZ7 376 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 PRNDQ9UKY0 176 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 WIPI2Q9Y4P8 454 aa10.55□□□□□ -0.72
COL8A1-201ENST00000261037 ARFGEF1Q9Y6D6 1849 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 IGSF23A1L1A6 192 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 TMEM210A6NLX4 147 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 C9orf172C9J069 976 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 KIR3DL2P43630 455 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 KLF9Q13886 244 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PHYHIPLQ96FC7 376 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 FUT9Q9Y231 359 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 TRIP11Q15643 1979 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 IGHV1-45A0A0A0MS14 117 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 GZMHP20718 246 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 FAHD2BQ6P2I3 314 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-201ENST00000261037 INO80CQ6PI98 192 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-201ENST00000261037 LRRC75AQ8NAA5 344 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 C10orf35Q96D05 121 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 FAHD2AQ96GK7 314 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 MYO7AQ13402 2215 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 LOC102724200A0A096LPH7 203 aaPredicted RBP10.54□□□□□ -0.72
COL8A1-201ENST00000261037 ANAPC16Q96DE5 110 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 SNX22Q96L94 193 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 CHST5Q9GZS9 411 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 RBM38Q9H0Z9 239 aaKnown RBP10.54□□□□□ -0.72
COL8A1-201ENST00000261037 SCN4AP35499 1836 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PPIAL4EA0A075B759 164 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 LEUTXA8MZ59 168 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PPIAL4DF5H284 164 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 ZNF253O75346 499 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PPIAL4FP0DN26 164 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 IER3P46695 156 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 GGTLC2Q14390 218 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 TEX30Q5JUR7 227 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 OR5A2Q8NGI9 324 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PIPOXQ9P0Z9 390 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 PPIAL4AQ9Y536 164 aa10.54□□□□□ -0.72
COL8A1-201ENST00000261037 NANOS3P60323 173 aaKnown RBP10.53□□□□□ -0.72
COL8A1-201ENST00000261037 B2MP61769 119 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 LDLRAD3Q86YD5 345 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 MUC15Q8N387 334 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 ST6GALNAC2Q9UJ37 374 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 ADAM11O75078 769 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 PRDX2P32119 198 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
COL8A1-201ENST00000261037 HIST3H3Q16695 136 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 TMEM91Q6ZNR0 172 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 FAM216AQ8WUB2 273 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 C1RLQ9NZP8 487 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 MELTFP08582 738 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 LOXL3P58215 753 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 MAP1LC3CQ9BXW4 147 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 PARP11Q9NR21 331 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 A0A0J9YW62 118 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 HELTA6NFD8 242 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 NKX2-8O15522 239 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 RBM11P57052 281 aaKnown RBP10.53□□□□□ -0.72
COL8A1-201ENST00000261037 ISXQ2M1V0 245 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 BVESQ8NE79 360 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 STARD4Q96DR4 205 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 MS4A3Q96HJ5 214 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 PGLYRP3Q96LB9 341 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 IL17BQ9UHF5 180 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 CGB1A6NKQ9 187 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 J3QR06 171 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 CDK2AP1O14519 115 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 PSG4Q00888 419 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 RIGQ13278 110 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 WDR54Q9H977 334 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 VAX2Q9UIW0 290 aa10.53□□□□□ -0.72
COL8A1-201ENST00000261037 H3BVH4 76 aa10.52□□□□□ -0.72
COL8A1-201ENST00000261037 IGSF11Q5DX21 431 aa10.52□□□□□ -0.72
COL8A1-201ENST00000261037 C9orf62Q8N4C0 152 aa10.52□□□□□ -0.72
COL8A1-201ENST00000261037 OIT3Q8WWZ8 545 aa10.52□□□□□ -0.72
COL8A1-201ENST00000261037 ABHD14BQ96IU4 210 aa10.52□□□□□ -0.72
COL8A1-201ENST00000261037 GPX7Q96SL4 187 aaPredicted RBP10.52□□□□□ -0.72
COL8A1-201ENST00000261037 RAB33BQ9H082 229 aa10.52□□□□□ -0.72
COL8A1-201ENST00000261037 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.72
COL8A1-201ENST00000261037 APCSP02743 223 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 AREGP15514 252 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 VDAC1P21796 283 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 RPL31P62899 125 aaKnown RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 ZNF501Q96CX3 271 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 MS4A7Q9GZW8 240 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 MS4A5Q9H3V2 200 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 HIGD1AQ9Y241 93 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 SIRT4Q9Y6E7 314 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 ELOBQ15370 118 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 COL13A1Q5TAT6 717 aaPredicted RBP10.52□□□□□ -0.73
COL8A1-201ENST00000261037 SLC35E3Q7Z769 313 aa10.52□□□□□ -0.73
COL8A1-201ENST00000261037 TMEM171Q8WVE6 324 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms