RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CMTM1Q8IZ96 169 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 ITLN1Q8WWA0 313 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 DCUN1D4Q92564 292 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 TP53RKQ96S44 253 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 TMEM222Q9H0R3 208 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 CCL28Q9NRJ3 127 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 ZDHHC8Q9ULC8 765 aa23.22■■□□□ 1.31
CCM2-201ENST00000258781 H0YIZ8 118 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 B3GALNT1O75752 331 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 GRNP28799 593 aaKnown RBP23.21■■□□□ 1.31
CCM2-201ENST00000258781 GCSAMQ8N6F7 178 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 GSKIPQ9P0R6 139 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 OR1A1Q9P1Q5 309 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 IL19Q9UHD0 177 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 PLCE1Q9P212 2302 aa23.21■■□□□ 1.31
CCM2-201ENST00000258781 KANTRA0A1W2PQU2 76 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 BCL2L11O43521 198 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 PRDX2P32119 198 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 BSPH1Q075Z2 132 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 RAB32Q13637 225 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 SNTB1Q13884 538 aaKnown RBP23.2■■□□□ 1.3
CCM2-201ENST00000258781 CA5BP1Q8WTZ4 195 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 COQ2Q96H96 371 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 NGBQ9NPG2 151 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 KIF25Q9UIL4 384 aa23.2■■□□□ 1.3
CCM2-201ENST00000258781 HSD17B6O14756 317 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 PSG2P11465 335 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 TNFSF4P23510 183 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 S100GP29377 79 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 SPRNQ5BIV9 151 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 CD177Q8N6Q3 437 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 OR10V1Q8NGI7 309 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 KMT2BQ9UMN6 2715 aaPredicted RBP23.19■■□□□ 1.3
CCM2-201ENST00000258781 OOEPA6NGQ2 149 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 TUBAL3A6NHL2 446 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 LHBP01229 141 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 IGHV1-46P01743 117 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 C4orf17Q53FE4 359 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 CLLU1Q5K131 121 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 BVESQ8NE79 360 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 WFIKKN1Q96NZ8 548 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 METRNQ9UJH8 293 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 TMED3Q9Y3Q3 217 aa23.19■■□□□ 1.3
CCM2-201ENST00000258781 LUMP51884 338 aaPredicted RBP23.18■■□□□ 1.3
CCM2-201ENST00000258781 UBA52P62987 128 aaKnown RBP23.18■■□□□ 1.3
CCM2-201ENST00000258781 TNFAIP6P98066 277 aaPredicted RBP23.18■■□□□ 1.3
CCM2-201ENST00000258781 AESQ08117 197 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 TESK1Q15569 626 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 LYZL2Q7Z4W2 148 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 PRR18Q8N4B5 295 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 TMEM56Q96MV1 263 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 DNAJB11Q9UBS4 358 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 UBE2J1Q9Y385 318 aaPredicted RBP23.18■■□□□ 1.3
CCM2-201ENST00000258781 TMEM56-RWDD3S4R434 201 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 ANKHD1Q8IWZ3 2542 aaKnown RBP23.18■■□□□ 1.3
CCM2-201ENST00000258781 HCFC1P51610 2035 aa23.18■■□□□ 1.3
CCM2-201ENST00000258781 B8ZZF3 427 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 HSPA12AO43301 675 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 HEXAP06865 529 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 ESCO2Q56NI9 601 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 C6orf183Q5T699 404 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 LHFPL5Q8TAF8 219 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 RNASE6Q93091 150 aaKnown RBP23.17■■□□□ 1.3
CCM2-201ENST00000258781 ERGIC1Q969X5 290 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 OR5AC2Q9NZP5 309 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 ZNF462Q96JM2 2506 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 IGKV1D-17A0A075B6S4 117 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 RPS10-NUDT3A0A1W2PQS6 291 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 WNT2P09544 360 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 KRBOX4Q5JUW0 171 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 GSX2Q9BZM3 304 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 SHARPINQ9H0F6 387 aa23.17■■□□□ 1.3
CCM2-201ENST00000258781 C12orf77C9JDV5 145 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 ZNF737O75373 536 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 C1QL1O75973 258 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 TFF1P04155 84 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 NUP62P37198 522 aaPredicted RBP23.16■■□□□ 1.3
CCM2-201ENST00000258781 GABRA2P47869 451 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 RAB14P61106 215 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 ADIPOQQ15848 244 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 SCARB1Q8WTV0 552 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 DIRC2Q96SL1 478 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 DNTTIP1Q9H147 329 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 KIAA2026Q5HYC2 2103 aa23.16■■□□□ 1.3
CCM2-201ENST00000258781 DUXBA0A1W2PPF3 345 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 LINC00862A6NCI5 91 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 H0Y980 276 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 PGLYRP1O75594 196 aaPredicted RBP23.15■■□□□ 1.3
CCM2-201ENST00000258781 ADH4P08319 380 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 UCP1P25874 307 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 S100A10P60903 97 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 TRAT1Q6PIZ9 186 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 MEX3BQ6ZN04 569 aaKnown RBP23.15■■□□□ 1.3
CCM2-201ENST00000258781 ZNF843Q8N446 348 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 PPP1R35Q8TAP8 253 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 Q8TCH9 128 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 GALMQ96C23 342 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 AKR1E2Q96JD6 320 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 RNF7Q9UBF6 113 aa23.15■■□□□ 1.3
CCM2-201ENST00000258781 ZG16O60844 167 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms