RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 ACAA2P42765 397 aaKnown RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 NTMQ9P121 344 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 CHST1O43916 411 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 IER3P46695 156 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TWIST1Q15672 202 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 GABRA6Q16445 453 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM255AQ5JRV8 349 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 PWWP2BQ6NUJ5 590 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM108Q6UXF1 575 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TRAV17A0A0B4J275 112 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ARG1P05089 322 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SPATA45Q537H7 98 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 RSPO2Q6UXX9 243 aaPredicted RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 MTURNQ8N3F0 131 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 GVQW1Q8N7I0 195 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SLC25A40Q8TBP6 338 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SF3B5Q9BWJ5 86 aaKnown RBP4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM30AQ9NV96 361 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SPTY2D1-AS1A0A0U1RR47 76 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 FFAR1O14842 300 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 PEX11BO96011 259 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 AMY1AP04745 511 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF260Q3ZCT1 412 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TSPO2Q5TGU0 170 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 ERASQ7Z444 233 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 SPEM1Q8N4L4 309 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM251Q8N6I4 163 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 OR1N2Q8NGR9 330 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 LRRC29Q8WV35 223 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 GHITMQ9H3K2 345 aa4.23□□□□□ -1.73
RC3H1-201ENST00000258349 LIPT2A6NK58 231 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 PPYP01298 95 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MT-ND6P03923 174 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MYOGP15173 224 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ZNF32P17041 273 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ID1P41134 155 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CYB561D1Q8N8Q1 229 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 OR4B1Q8NGF8 309 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MRGPRDQ8TDS7 321 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 TXNDC17Q9BRA2 123 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 H0Y980 276 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CYR61O00622 381 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 SEC11BP0C7V7 166 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 SRD5A2P31213 254 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 SUCLG1P53597 346 aaKnown RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CD300CQ08708 224 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 SKP2Q13309 424 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 IZUMO4Q1ZYL8 232 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 WDFY1Q8IWB7 410 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 SFTPA2Q8IWL1 248 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 SFTPA1Q8IWL2 248 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 GAPTQ8N292 157 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 COX14Q96I36 57 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MOGAT1Q96PD6 335 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 PMCHL2Q9BQD1 86 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ELOVL1Q9BW60 279 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 PIPOXQ9P0Z9 390 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 UQCR10Q9UDW1 63 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 OR51B2Q9Y5P1 312 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CTSVO60911 334 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CRYBA1P05813 215 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MELTFP08582 738 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 FAM209AQ5JX71 171 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 VN1R17PQ8TDU5 208 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 C7orf77A4D0Y5 90 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CDC42EP2O14613 210 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CA11O75493 328 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 EIF3IQ13347 325 aaKnown RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 FZD5Q13467 585 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 PSG5Q15238 335 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 C8orf82Q6P1X6 216 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 TEPPQ6URK8 271 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 THSD4Q6ZMP0 1018 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 FLYWCH2Q96CP2 140 aaKnown RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 GMPPAQ96IJ6 420 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 A0A0U1RQV5 110 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 LNP1A1A4G5 178 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 M0R296 226 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ADAP1O75689 374 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CA2P00918 260 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 BTF3P20290 206 aaKnown RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 PLPPR5Q32ZL2 321 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 TGIF2LYQ8IUE0 185 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 VSTM2LQ96N03 204 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 ASCL3Q9NQ33 180 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CYB5R3P00387 301 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 RTN4RL1Q86UN2 441 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MYEOVQ96EZ4 313 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 TNFSF18Q9UNG2 199 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 HIGD1AQ9Y241 93 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 MED19A0JLT2 244 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 JOSD1Q15040 202 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 VAX1Q5SQQ9 334 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 OR5A2Q8NGI9 324 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 OR4P4Q8NGL7 312 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 GPBAR1Q8TDU6 330 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 RAB37Q96AX2 223 aa4.22□□□□□ -1.73
RC3H1-201ENST00000258349 CDX2Q99626 313 aaPredicted RBP4.22□□□□□ -1.73
RC3H1-201ENST00000258349 TMEM208Q9BTX3 173 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms