RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 RNASE11Q8TAA1 199 aaKnown RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 SARAFQ96BY9 339 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 SAT2Q96F10 170 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 SLC2A9Q9NRM0 540 aa12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 UBE2J1Q9Y385 318 aaPredicted RBP12.48□□□□□ -0.41
TRAFD1-201ENST00000257604 DEGS1O15121 323 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 IFNA21P01568 189 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 GNRHRP30968 328 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 RPS10P46783 165 aaKnown RBP12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 GGNBP1Q5YKI7 109 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 RHOVQ96L33 236 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 RARRES2Q99969 163 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF251Q9BRH9 671 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 ABHD14AQ9BUJ0 271 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 RNF150Q9ULK6 438 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 KCNS2Q9ULS6 477 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 FOXI3A8MTJ6 420 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 NUDT19A8MXV4 375 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 CLN5O75503 358 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 ALDH3B1P43353 468 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 KIR2DL2P43627 348 aaPredicted RBP12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 SULT1A2P50226 295 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 GNG3P63215 75 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 ARL6IP1Q15041 203 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 OR2B11Q5JQS5 317 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF343Q6P1L6 599 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 SUMF2Q8NBJ7 301 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 EDARADDQ8WWZ3 215 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 DCAF16Q9NXF7 216 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 ABCA1O95477 2261 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 DOCK11Q5JSL3 2073 aa12.47□□□□□ -0.41
TRAFD1-201ENST00000257604 FAM157AC9JC47 383 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 SLC34A2O95436 690 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 MDKP21741 143 aaPredicted RBP12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 CAMLGP49069 296 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 OR8G1Q15617 311 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF124Q15973 351 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 EIF5AL1Q6IS14 154 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 COLCA1Q6ZS62 124 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 RPL36A-HNRNPH2H7BZ11 118 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 H7C1Q1 480 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 TK1P04183 234 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 RPS2P15880 293 aaKnown RBP12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 CASP6P55212 293 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 NHLH2Q02577 135 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 PSG7Q13046 419 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 C15orf54Q8N8G6 183 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 ZNF391Q9UJN7 358 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 TRAPPC2LQ9UL33 140 aa12.46□□□□□ -0.41
TRAFD1-201ENST00000257604 M0R1B8 84 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 SMIM6P0DI80 62 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 PPP1CCP36873 323 aaKnown RBP12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 UCP2P55851 309 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 TMEM268Q5VZI3 342 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 FBXW12Q6X9E4 464 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 ASCL5Q7RTU5 278 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 LHFPL1Q86WI0 220 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 RFESDQ8TAC1 157 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 FAM213BQ8TBF2 198 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 CNTNAP3Q9BZ76 1288 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 C1orf123Q9NWV4 160 aa12.46□□□□□ -0.42
TRAFD1-201ENST00000257604 ZNF891A8MT65 544 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 UMAD1C9J7I0 102 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 CST4P01036 141 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 PPYP01298 95 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 PET100P0DJ07 73 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 NDUFA6P56556 154 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 GUK1Q16774 197 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 CISD2Q8N5K1 135 aaKnown RBP12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 OR5P3Q8WZ94 311 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 UBE2CO00762 179 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 OR8U8P0C7N1 319 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 EDDM3AQ14507 147 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 ZNF573Q86YE8 665 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 GAPTQ8N292 157 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 ZNF561Q8N587 486 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 KLF14Q8TD94 323 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 SPSB4Q96A44 273 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 PPP1R3CQ9UQK1 317 aa12.45□□□□□ -0.42
TRAFD1-201ENST00000257604 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 A0A1B0GV90 55 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 SMPD2O60906 423 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 MT-ND4LP03901 98 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 RAB5AP20339 215 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 ZNF154Q13106 437 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 RBMXL1Q96E39 390 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 ERRFI1Q9UJM3 462 aaPredicted RBP12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 PROCRQ9UNN8 238 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 PLA2G5P39877 138 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 FGF12P61328 243 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 OR5A2Q8NGI9 324 aa12.44□□□□□ -0.42
TRAFD1-201ENST00000257604 GTF3AQ92664 365 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms