RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 KLK13Q9UKR3 277 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 K7N7A8 449 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 HPRT1P00492 218 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 ZDHHC8Q9ULC8 765 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 SCO1O75880 301 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 ZNF714Q96N38 554 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 SPSB2Q99619 263 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 PKIBQ9C010 78 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 SBF2Q86WG5 1849 aa16.47■□□□□ 0.23
PTPRE-201ENST00000254667 NPIPB13A6NJU9 1138 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 NPIPB4C9JG80 1138 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 G6PCP35575 357 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 ID4P47928 161 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 FGF8P55075 233 aaPredicted RBP16.46■□□□□ 0.23
PTPRE-201ENST00000254667 TMUB1Q9BVT8 246 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 OR2J3O76001 311 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 ANKRD55Q3KP44 614 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 ADAD2Q8NCV1 583 aaKnown RBP16.46■□□□□ 0.23
PTPRE-201ENST00000254667 FBLIM1Q8WUP2 373 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 SCMH1Q96GD3 660 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 ABHD14AQ9BUJ0 271 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 SNCGO76070 127 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 PSG2P11465 335 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 ADAMTS17Q8TE56 1095 aa16.46■□□□□ 0.23
PTPRE-201ENST00000254667 CXCL3P19876 107 aa16.46■□□□□ 0.22
PTPRE-201ENST00000254667 SHISA5Q8N114 240 aa16.46■□□□□ 0.22
PTPRE-201ENST00000254667 KCNE5Q9UJ90 142 aa16.46■□□□□ 0.22
PTPRE-201ENST00000254667 IGLV3-19P01714 112 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 C1orf100Q5SVJ3 147 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 FAM78BQ5VT40 261 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 TMEM208Q9BTX3 173 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 PCM1Q15154 2024 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 NDUFA2O43678 99 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 CLDN14O95500 239 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 BSXQ3C1V8 233 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 PPP1R3EQ9H7J1 279 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 VAX2Q9UIW0 290 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 ZNF716A6NP11 495 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 PPP1CCP36873 323 aaKnown RBP16.45■□□□□ 0.22
PTPRE-201ENST00000254667 ZNF345Q14585 488 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 RFLNBQ8N5W9 214 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 DYRK2Q92630 601 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 ANAPC16Q96DE5 110 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 TMEM74BQ9NUR3 256 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 IGHMP01871 453 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 HTR1DP28221 377 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 CCL8P80075 99 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 FAM210BQ96KR6 192 aa16.45■□□□□ 0.22
PTPRE-201ENST00000254667 SF3B6Q9Y3B4 125 aaKnown RBP16.45■□□□□ 0.22
PTPRE-201ENST00000254667 C11orf94C9JXX5 98 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 IGKV3-11P04433 115 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 MMDQ15546 238 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 TEPPQ6URK8 271 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 STPG2Q8N412 459 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 TMEM37Q8WXS4 190 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 OR2V2Q96R30 315 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 ASCL3Q9NQ33 180 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 VSIG4Q9Y279 399 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 TRAV39A0A0B4J263 110 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 J3QR06 171 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 FCN1O00602 326 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 AMTP48728 403 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 PSG5Q15238 335 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 SNX22Q96L94 193 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 ZNF488Q96MN9 340 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 SCN3AQ9NY46 2000 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 C10orf113Q5VZT2 155 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 DPPA3Q6W0C5 159 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 OR11H7Q8NGC8 314 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 OR1L6Q8NGR2 347 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 PRSS50Q9UI38 385 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 LIPGQ9Y5X9 500 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 ZNFX1Q9P2E3 1918 aaKnown RBP16.44■□□□□ 0.22
PTPRE-201ENST00000254667 B4DEV8 164 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 SEC11BP0C7V7 166 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 MC5RP33032 325 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 FAM74A3Q4VXF1 159 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 OR4P4Q8NGL7 312 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 HDHD3Q9BSH5 251 aaPredicted RBP16.44■□□□□ 0.22
PTPRE-201ENST00000254667 TOLLIPQ9H0E2 274 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 LPAR5Q9H1C0 372 aa16.44■□□□□ 0.22
PTPRE-201ENST00000254667 MMP9P14780 707 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 OR8G5Q8NG78 346 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 SFXN3Q9BWM7 321 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 PRDM14Q9GZV8 571 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 F5H697 171 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 SAXO1Q8IYX7 474 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 C9orf62Q8N4C0 152 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 C7orf66A4D0T2 115 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 PMCHP20382 165 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 B2MP61769 119 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 FAM209AQ5JX71 171 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 SLC35E3Q7Z769 313 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 OR4X1Q8NH49 305 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 OR51B2Q9Y5P1 312 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 LHFPL6Q9Y693 200 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 J3QW42 95 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 ADRA2AP08913 450 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 HIST1H3AP68431 136 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 CLEC2AQ6UVW9 174 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms