RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 TUBAL3A6NHL2 446 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 EIF3GO75821 320 aaKnown RBP eCLIP12.46□□□□□ -0.42
MBD4-201ENST00000249910 MBPP02686 304 aaPredicted RBP12.46□□□□□ -0.42
MBD4-201ENST00000249910 IL13RA2Q14627 380 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 P2RY6Q15077 328 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 EIF2S3LQ2VIR3 472 aaKnown RBP12.46□□□□□ -0.42
MBD4-201ENST00000249910 AARDQ4LEZ3 155 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 Q6ZS49 121 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 C11orf53Q8IXP5 236 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 TMED6Q8WW62 240 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 SMIM3Q9BZL3 60 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 SH3BGRL2Q9UJC5 107 aa12.46□□□□□ -0.42
MBD4-201ENST00000249910 ERRFI1Q9UJM3 462 aaPredicted RBP12.46□□□□□ -0.42
MBD4-201ENST00000249910 FBP1P09467 338 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 BMP5P22003 454 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 VHLLQ6RSH7 139 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 SFT2D1Q8WV19 159 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 PRRX2Q99811 253 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 MEMO1Q9Y316 297 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 SLC25A15Q9Y619 301 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 IGLV1-44P01699 117 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 HKR1P10072 659 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 FAM27E3Q08E93 113 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 FAM53AQ6NSI3 398 aaPredicted RBP12.45□□□□□ -0.42
MBD4-201ENST00000249910 SLC16A13Q7RTY0 426 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 LINC00596Q86U02 117 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 OR10J5Q8NHC4 309 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 C18orf12Q96KH6 178 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 SUCNR1Q9BXA5 334 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
MBD4-201ENST00000249910 TRAPPC2LQ9UL33 140 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 TP53TG5Q9Y2B4 290 aa12.45□□□□□ -0.42
MBD4-201ENST00000249910 NCOR2Q9Y618 2525 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 A0A1B0GV90 55 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 SIGLEC5O15389 551 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 DEDDO75618 318 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 TUSC2O75896 110 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 S100A8P05109 93 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 PET100P0DJ07 73 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 LYL1P12980 280 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 BAP18Q8IXM2 172 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 CISD2Q8N5K1 135 aaKnown RBP12.44□□□□□ -0.42
MBD4-201ENST00000249910 AQP10Q96PS8 301 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 TUBD1Q9UJT1 453 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 UBE2J1Q9Y385 318 aaPredicted RBP12.44□□□□□ -0.42
MBD4-201ENST00000249910 PROB1E7EW31 1015 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 M0R1B8 84 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 GPR37O15354 613 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 NXPH3O95157 252 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 GCH1P30793 250 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 ZNF146Q15072 292 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 RPL7L1Q6DKI1 246 aaKnown RBP12.44□□□□□ -0.42
MBD4-201ENST00000249910 LGI3Q8N145 548 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 TPRX1Q8N7U7 411 aa12.44□□□□□ -0.42
MBD4-201ENST00000249910 TPRP12270 2363 aaKnown RBP12.43□□□□□ -0.42
MBD4-201ENST00000249910 USF3Q68DE3 2245 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 MKRN2OSH3BPM6 223 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 K7EPK0 472 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 RPL12P30050 165 aaKnown RBP12.43□□□□□ -0.42
MBD4-201ENST00000249910 NAAAQ02083 359 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 COTL1Q14019 142 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 SSX2Q16385 188 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 ZNF718Q3SXZ3 478 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 FAM71E2Q8N5Q1 922 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 CCDC71LQ8N9Z2 235 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 OR51H1Q8NH63 302 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 BSCL2Q96G97 398 aaPredicted RBP12.43□□□□□ -0.42
MBD4-201ENST00000249910 TMEM222Q9H0R3 208 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 SLC25A32Q9H2D1 315 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 RIMS4Q9H426 269 aaPredicted RBP12.43□□□□□ -0.42
MBD4-201ENST00000249910 BARX1Q9HBU1 254 aaPredicted RBP12.43□□□□□ -0.42
MBD4-201ENST00000249910 WASF3Q9UPY6 502 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 POLEQ07864 2286 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 NKX2-6A6NCS4 301 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 GPR31O00270 319 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 HSPA12AO43301 675 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 HAND1O96004 215 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 HLA-DRB3P79483 266 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 AESQ08117 197 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 SRSF7Q16629 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
MBD4-201ENST00000249910 WDR82Q6UXN9 313 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 STPG2Q8N412 459 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 LRTM2Q8N967 370 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 OR2Z1Q8NG97 314 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
MBD4-201ENST00000249910 CHD3Q12873 2000 aaKnown RBP12.42□□□□□ -0.42
MBD4-201ENST00000249910 A8MXK9 166 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 SH2D1BO14796 132 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 PTBP3O95758 552 aaKnown RBP12.42□□□□□ -0.42
MBD4-201ENST00000249910 TPT1P13693 172 aaKnown RBP12.42□□□□□ -0.42
MBD4-201ENST00000249910 CASP6P55212 293 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 TMEM33P57088 247 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 HFEQ30201 348 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 SPRNQ5BIV9 151 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 C1orf185Q5T7R7 199 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
MBD4-201ENST00000249910 ZNF497Q6ZNH5 498 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 ZNF695Q8IW36 515 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 SPACA3Q8IXA5 215 aa12.42□□□□□ -0.42
MBD4-201ENST00000249910 Q8IYB0 196 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms