RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SLC25A31Q9H0C2 315 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 NPIPB11E5RHQ5 1161 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 IGHG3P01860 377 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 HEXAP06865 529 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 PAX9P55771 341 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 PSG7Q13046 419 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 GABRA6Q16445 453 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 FAM213BQ8TBF2 198 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 GPR146Q96CH1 333 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 TREM2Q9NZC2 230 aa16.54■□□□□ 0.24
CDC42EP1-201ENST00000249014 GTF3C1Q12789 2109 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 CFAP47Q6ZTR5 3102 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 A0A1B0GV50 99 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 CDRT15L2A8MXV6 281 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 PGA5P0DJD9 388 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 EPHA1P21709 976 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 PPP1CCP36873 323 aaKnown RBP16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 MDH2P40926 338 aaKnown RBP16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 DYNLT3P51808 116 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 IZUMO4Q1ZYL8 232 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 FAM214BQ7L5A3 538 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 TMEM217Q8N7C4 229 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR1J1Q8NGS3 322 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 ABHD14AQ9BUJ0 271 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 EIF5A2Q9GZV4 153 aaKnown RBP16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 POLDIP2Q9Y2S7 368 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 KPTNQ9Y664 436 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 RAC2P15153 192 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 Q8IYB0 196 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR10Z1Q8NGY1 313 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 OR2G3Q8NGZ4 309 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 TRAPPC2LQ9UL33 140 aa16.53■□□□□ 0.24
CDC42EP1-201ENST00000249014 KIAA2026Q5HYC2 2103 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 IQCF6A8MYZ5 107 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 NXPH2O95156 264 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 IGKV1-39P01597 117 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 IGKV1D-39P04432 117 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 GRPP07492 148 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 WT1P19544 449 aaPredicted RBP16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 S100GP29377 79 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 MPV17P39210 176 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 ZNF146Q15072 292 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 PEA15Q15121 130 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 GUSBP1Q15486 140 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 Q6ZT83 130 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 PIP4P1Q86T03 277 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 ZNF295-AS1Q8N0V1 137 aa16.52■□□□□ 0.24
CDC42EP1-201ENST00000249014 PRR14LQ5THK1 2151 aa16.52■□□□□ 0.23
CDC42EP1-201ENST00000249014 KIAA1324LA8MWY0 1029 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 SERPINE2P07093 398 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 MMP9P14780 707 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 AKIRIN2Q53H80 203 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 Q6ZRM9 215 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 MOB1BQ7L9L4 216 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 PPP1R3CQ9UQK1 317 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 MEX3AA1L020 520 aaKnown RBP16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 CD82P27701 267 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 AKR1C3P42330 323 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 CEBPDP49716 269 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 HOXA4Q00056 320 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 SHEQ5VZ18 495 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 CNEP1R1Q8N9A8 125 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 DEFB124Q8NES8 71 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 KLF14Q8TD94 323 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 RXFP4Q8TDU9 374 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 MLXQ9UH92 298 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 PRELID3BQ9Y3B1 194 aa16.51■□□□□ 0.23
CDC42EP1-201ENST00000249014 SPAARA0A1B0GVQ0 90 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 WRBO00258 174 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 AGFG2O95081 481 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 INO80CQ6PI98 192 aaPredicted RBP16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 MBNL3Q9NUK0 354 aaKnown RBP16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 TINAGQ9UJW2 476 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 FBXO7Q9Y3I1 522 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 GPR37O15354 613 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 WNT2P09544 360 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 RUNX1Q01196 453 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 BAXQ07812 192 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 OR8G1Q15617 311 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 VWA1Q6PCB0 445 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 ASCL3Q9NQ33 180 aa16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 DSPP15924 2871 aaKnown RBP16.5■□□□□ 0.23
CDC42EP1-201ENST00000249014 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 A0A1B0GU03 582 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 H3BP45 60 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 SH2D1BO14796 132 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 MLNRO43193 412 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 HSPA12AO43301 675 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 FTH1P19P0C7X4 201 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 KIR2DL2P43627 348 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 HMGN3Q15651 99 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 C9orf106Q8NAJ2 232 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 SAV1Q9H4B6 383 aaPredicted RBP16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 WIPI2Q9Y4P8 454 aa16.49■□□□□ 0.23
CDC42EP1-201ENST00000249014 COLCA2A8K830 154 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 PSPNO60542 156 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 SLC25A6P12236 298 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 CCL20P78556 96 aa16.48■□□□□ 0.23
CDC42EP1-201ENST00000249014 CXorf67Q86X51 503 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms