RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 KIR2DL1P43626 348 aaPredicted RBP11.66□□□□□ -0.54
NEK4-201ENST00000233027 UBE2V2Q15819 145 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 ZNF519Q8TB69 540 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 PCM1Q15154 2024 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 CIDEAO60543 219 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 CXorf1O96002 111 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 ORM1P02763 201 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 OR4A8P0C604 315 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 ASAH2BP0C7U1 165 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 SEC11BP0C7V7 166 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 LIMS1P48059 325 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 REG1BP48304 166 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 COL10A1Q03692 680 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 RND1Q92730 232 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 GHITMQ9H3K2 345 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 ERVH48-1M5A8F1 160 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 GCM2O75603 506 aaPredicted RBP11.66□□□□□ -0.54
NEK4-201ENST00000233027 RHBDL1O75783 438 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 RBM11P57052 281 aaKnown RBP11.66□□□□□ -0.54
NEK4-201ENST00000233027 PKIAP61925 76 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 RPL24P83731 157 aaKnown RBP11.66□□□□□ -0.54
NEK4-201ENST00000233027 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 USP54Q70EL1 1684 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 TMSB15BA0A087X1C1 80 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 ANKRD55Q3KP44 614 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 MDP1Q86V88 176 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 TPRX1Q8N7U7 411 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 CDS2O95674 445 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 SLC35B1P78383 322 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 RSG1Q9BU20 258 aa11.66□□□□□ -0.54
NEK4-201ENST00000233027 J3QT63 122 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 DEDDO75618 318 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 SNCGO76070 127 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 PSMB2P49721 201 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 TRIP6Q15654 476 aaKnown RBP11.65□□□□□ -0.54
NEK4-201ENST00000233027 KHDC3LQ587J8 217 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 C1QTNF12Q5T7M4 302 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 GNG7O60262 68 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 UPK3AO75631 287 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 HARBI1Q96MB7 349 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 NRIP2Q9BQI9 281 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 THYN1Q9P016 225 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 IGSF23A1L1A6 192 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 FAM74A7A6NL05 159 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 C1QL1O75973 258 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 KLK2P20151 261 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 MMP16P51512 607 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 FAM74A3Q4VXF1 159 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 CELA2AP08217 269 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 RASL11BQ9BPW5 248 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 PITPNC1Q9UKF7 332 aa11.65□□□□□ -0.54
NEK4-201ENST00000233027 NINQ8N4C6 2090 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 CFDP00746 253 aaPredicted RBP11.65□□□□□ -0.55
NEK4-201ENST00000233027 NMBP08949 121 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 HTN1P15515 57 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 BMI1P35226 326 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 EIF4EBP2Q13542 120 aaPredicted RBP11.65□□□□□ -0.55
NEK4-201ENST00000233027 ZNF660Q6AZW8 331 aaPredicted RBP11.65□□□□□ -0.55
NEK4-201ENST00000233027 SPRED2Q7Z698 418 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 OR5A2Q8NGI9 324 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 AP5S1Q9NUS5 200 aa11.65□□□□□ -0.55
NEK4-201ENST00000233027 MOSPD3O75425 235 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 MGPP08493 103 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 PLPPR5Q32ZL2 321 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 OVCH2Q7RTZ1 564 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 VSTM2AQ8TAG5 236 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 OR51B2Q9Y5P1 312 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 OR2T8A6NH00 312 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 RTP5Q14D33 572 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 OR2J1Q9GZK6 312 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 MYO7AQ13402 2215 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 SULT1A2P50226 295 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 SUCLG1P53597 346 aaKnown RBP11.64□□□□□ -0.55
NEK4-201ENST00000233027 IFITM2Q01629 132 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 LILRB1Q8NHL6 650 aaPredicted RBP11.64□□□□□ -0.55
NEK4-201ENST00000233027 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 SYNGR1O43759 233 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 SMPD2O60906 423 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 PGA4P0DJD7 388 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 PGA5P0DJD9 388 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 NPY1RP25929 384 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 CEACAM3P40198 252 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 ID4P47928 161 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 GRAMD2BQ96HH9 432 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 RBM14Q96PK6 669 aaKnown RBP11.64□□□□□ -0.55
NEK4-201ENST00000233027 TBX15Q96SF7 602 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 SAP30LQ9HAJ7 183 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 ASCC3Q8N3C0 2202 aaKnown RBP11.64□□□□□ -0.55
NEK4-201ENST00000233027 PATE3B3GLJ2 98 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 RIGQ13278 110 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 FAM216AQ8WUB2 273 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 GPHA2Q96T91 129 aa11.64□□□□□ -0.55
NEK4-201ENST00000233027 ZNF665Q9H7R5 613 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms