RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 H1FOOQ8IZA3 346 aaPredicted RBP13.87□□□□□ -0.19
LTBR-201ENST00000228918 YPEL4Q96NS1 127 aa13.87□□□□□ -0.19
LTBR-201ENST00000228918 CABLES2Q9BTV7 478 aa13.87□□□□□ -0.19
LTBR-201ENST00000228918 DNAJC13O75165 2243 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 OR5B21A6NL26 309 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 HS3ST1O14792 307 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 SRP19P09132 144 aaKnown RBP13.86□□□□□ -0.19
LTBR-201ENST00000228918 ZNF573Q86YE8 665 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 RDH5Q92781 318 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 DDA1Q9BW61 102 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 UNKLQ9H9P5 680 aaKnown RBP13.86□□□□□ -0.19
LTBR-201ENST00000228918 MPC1Q9Y5U8 109 aa13.86□□□□□ -0.19
LTBR-201ENST00000228918 C19orf67A6NJJ6 358 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 ANKRD30BLA7E2S9 258 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 SPINK2P20155 84 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 S100GP29377 79 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 WNT5AP41221 380 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 PLP2Q04941 152 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 OR1C1Q15619 314 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 ZNF295-AS1Q8N0V1 137 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 FAM58AQ8N1B3 248 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 C17orf78Q8N4C9 275 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 TMEM251Q8N6I4 163 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 OR10J5Q8NHC4 309 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 GPR146Q96CH1 333 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 CDX2Q99626 313 aaPredicted RBP13.85□□□□□ -0.19
LTBR-201ENST00000228918 STRADBQ9C0K7 418 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 LIPGQ9Y5X9 500 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 C9orf172C9J069 976 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 RAB2AP61019 212 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 GNG3P63215 75 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 HAGHQ16775 308 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 C9orf152Q5JTZ5 239 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 AKR1C8PQ5T2L2 129 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 ADAM5Q6NVV9 412 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 PFDN5Q99471 154 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 HIPK2Q9H2X6 1198 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 DLL3Q9NYJ7 618 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 AHCTF1Q8WYP5 2266 aa13.85□□□□□ -0.19
LTBR-201ENST00000228918 A0A1B0GU03 582 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 KIAA1324LA8MWY0 1029 aaPredicted RBP13.84□□□□□ -0.19
LTBR-201ENST00000228918 C3orf80F5H4A9 247 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 SCAF4O95104 1147 aaKnown RBP13.84□□□□□ -0.19
LTBR-201ENST00000228918 OR2C1O95371 312 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 WNT2P09544 360 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 JMJD7P0C870 316 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 PSG2P11465 335 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 SLC25A6P12236 298 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 TAS2R30P59541 319 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 ICAM4Q14773 271 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 TCEAL6Q6IPX3 200 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 NUFIP2Q7Z417 695 aaKnown RBP13.84□□□□□ -0.19
LTBR-201ENST00000228918 STX12Q86Y82 276 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 OR51H1Q8NH63 302 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 TOLLIPQ9H0E2 274 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 DOCK7Q96N67 2140 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 H3BQ15 152 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 DEGS1O15121 323 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 ST8SIA5O15466 376 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 APLNRP35414 380 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 LPAL2Q16609 132 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 Q3ZCU0 254 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 ZNF506Q5JVG8 444 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 DPPA3Q6W0C5 159 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 C1QL4Q86Z23 238 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 PKIBQ9C010 78 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 FOXJ2Q9P0K8 574 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 ABI3Q9P2A4 366 aa13.84□□□□□ -0.19
LTBR-201ENST00000228918 ERRFI1Q9UJM3 462 aaPredicted RBP13.84□□□□□ -0.19
LTBR-201ENST00000228918 PIGBOS1A0A0B4J2F0 54 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 NPIPB11E5RHQ5 1161 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 H3BP45 60 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 DFFBO76075 338 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 HSPB1P04792 205 aaKnown RBP13.83□□□□□ -0.2
LTBR-201ENST00000228918 OR2B8PP59922 312 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 TLE4Q04727 773 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 C3AR1Q16581 482 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 HEPN1Q6WQI6 88 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 C1orf210Q8IVY1 113 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 RAB39BQ96DA2 213 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 MUCL1Q96DR8 90 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 RBMXL1Q96E39 390 aaKnown RBP13.83□□□□□ -0.2
LTBR-201ENST00000228918 PLA2G3Q9NZ20 509 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 RHBDL1O75783 438 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 HBE1P02100 147 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 SERPINE2P07093 398 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 RD3LP0DJH9 198 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 RPL23AP62750 156 aaKnown RBP13.83□□□□□ -0.2
LTBR-201ENST00000228918 OR10V1Q8NGI7 309 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 CLDND2Q8NHS1 167 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 RAB40CQ96S21 281 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 OR51B6Q9H340 312 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 OR51I2Q9H344 312 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 OR1A1Q9P1Q5 309 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 PRSS50Q9UI38 385 aa13.83□□□□□ -0.2
LTBR-201ENST00000228918 MED12LQ86YW9 2145 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 ARGFXA6NJG6 315 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 H0YL77 283 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 SELLP14151 372 aa13.82□□□□□ -0.2
LTBR-201ENST00000228918 DEFA6Q01524 100 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms