RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.09□□□□□ -0.312e-6■■■■■ 36.6
NDFIP2-201ENST00000218652 A0A1W2PPV9 198 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 A0A1W2PQD3 144 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 CRXO43186 299 aaPredicted RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 VSIG10L2P0DP72 767 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 OR5A2Q8NGI9 324 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 ZNF488Q96MN9 340 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 CLN8Q9UBY8 286 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 IGHV3-21A0A0B4J1V1 117 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 A0A1W2PPE3 182 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 SMPD2O60906 423 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 AESQ08117 197 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 PTPMT1Q8WUK0 201 aaPredicted RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 SF3B5Q9BWJ5 86 aaKnown RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 CHST5Q9GZS9 411 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 SRSF10O75494 262 aaKnown RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 MUC1P15941 1255 aaPredicted RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 BMI1P35226 326 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 SULT1A2P50226 295 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 GZMMP51124 257 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 TMEM50BP56557 158 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 HIKESHIQ53FT3 197 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 LYRM7Q5U5X0 104 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 SLC23A3Q6PIS1 610 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 WNT2BQ93097 391 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 ST6GALNAC2Q9UJ37 374 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 TCFL5Q9UL49 500 aa13.09□□□□□ -0.31
NDFIP2-201ENST00000218652 PHIPQ8WWQ0 1821 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 TMEM265A0A087WTH1 108 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 IGSF23A1L1A6 192 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 HOXC4P09017 264 aaPredicted RBP13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 RFLNBQ8N5W9 214 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 RND1Q92730 232 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 SLC25A33Q9BSK2 321 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 OR2H1Q9GZK4 316 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 ALX4Q9H161 411 aaPredicted RBP13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 KLHDC2Q9Y2U9 406 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 INSIG2Q9Y5U4 225 aa13.08□□□□□ -0.31
NDFIP2-201ENST00000218652 ZNF207O43670 478 aaKnown RBP13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 SEMA7AO75326 666 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 PPP1CCP36873 323 aaKnown RBP13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 RAB24Q969Q5 203 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 COA4Q9NYJ1 87 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 SPINT1O43278 529 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 AGFG2O95081 481 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 ACP1P24666 158 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 OR10J1P30954 320 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 RIGQ13278 110 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 KHDC3LQ587J8 217 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 SAP30LQ9HAJ7 183 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 TNFRSF19Q9NS68 423 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 CFDP00746 253 aaPredicted RBP13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 LGALS7P47929 136 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 HOGA1Q86XE5 327 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 RSG1Q9BU20 258 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 CES1P1Q9UKY3 287 aa13.08□□□□□ -0.32
NDFIP2-201ENST00000218652 A0A1B0GU03 582 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 ADAM11O75078 769 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 NSUN5P2Q63ZY6 315 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 TEPPQ6URK8 271 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 CARFQ8N187 725 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 TMEM252Q8N6L7 170 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 C10orf35Q96D05 121 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 RASL11BQ9BPW5 248 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 MRPL37Q9BZE1 423 aaKnown RBP13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 OR5AC2Q9NZP5 309 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 WNT16Q9UBV4 365 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 RAB29O14966 203 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 BGLAPP02818 100 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 REG1BP48304 166 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 SLC25A40Q8TBP6 338 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 KLK13Q9UKR3 277 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 IFITM10A6NMD0 228 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 DIRC3C9JPN6 131 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 J3QR06 171 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 GPR35Q9HC97 309 aa13.07□□□□□ -0.32
NDFIP2-201ENST00000218652 FAM74A3Q4VXF1 159 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 ANGPTL4Q9BY76 406 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 MRPS18AQ9NVS2 196 aaKnown RBP13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 RREB1Q92766 1687 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 COL16A1Q07092 1604 aaPredicted RBP13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 NPIPB8E9PQR5 432 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 ZNHIT1O43257 154 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 SYNGR1O43759 233 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 PDE6DO43924 150 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 TRGC2P03986 189 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 NAT2P11245 290 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 CD99P14209 185 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 KIR3DL2P43630 455 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 DLX1P56177 255 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 BPIFA4PQ86YQ2 179 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 SLX1AQ9BQ83 275 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 RNF122Q9H9V4 155 aa13.06□□□□□ -0.32
NDFIP2-201ENST00000218652 A0A1W2PPC1 479 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms