RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 OR10D4PQ8NGN7 298 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 ZNF665Q9H7R5 613 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 HSF4Q9ULV5 492 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 CST2P09228 141 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 ARG2P78540 354 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 RNF212Q495C1 297 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 Q6ZRM9 215 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 UBAC2Q8NBM4 344 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 MOB3AQ96BX8 217 aa12.9□□□□□ -0.34
EFNB1-201ENST00000204961 SYNGR4O95473 234 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 PLP2Q04941 152 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 ARL6IP1Q15041 203 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 SSX9Q7RTT3 188 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 ZDHHC23Q8IYP9 409 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 CNEP1R1Q8N9A8 125 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 BOD1Q96IK1 185 aa12.9□□□□□ -0.35
EFNB1-201ENST00000204961 A0A087WZY1 265 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 H3BQ15 152 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 ETV2O00321 342 aaPredicted RBP12.89□□□□□ -0.35
EFNB1-201ENST00000204961 CYB5BO43169 146 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 AGFG2O95081 481 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 IGHV2-70P01814 119 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 OR1C1Q15619 314 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 SELENOHQ8IZQ5 122 aaKnown RBP12.89□□□□□ -0.35
EFNB1-201ENST00000204961 RAB39BQ96DA2 213 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 SLC35B3Q9H1N7 401 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 TUBD1Q9UJT1 453 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 CD300LBA8K4G0 201 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 CEACAM18A8MTB9 384 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 CD55P08174 381 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 SURF2Q15527 256 aaPredicted RBP12.89□□□□□ -0.35
EFNB1-201ENST00000204961 ANAPC10Q9UM13 185 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 APC2O95996 2303 aa12.89□□□□□ -0.35
EFNB1-201ENST00000204961 WDR25Q64LD2 544 aaPredicted RBP12.88□□□□□ -0.35
EFNB1-201ENST00000204961 C6orf15Q6UXA7 325 aaPredicted RBP12.88□□□□□ -0.35
EFNB1-201ENST00000204961 OR10V1Q8NGI7 309 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 OR10J5Q8NHC4 309 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 APH1AQ96BI3 265 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 RBFOX3A6NFN3 312 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 WNT9BO14905 357 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 AGAP20933 346 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 CTSSP25774 331 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 PYY3Q5JQD4 70 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 SDSLQ96GA7 329 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 C18orf12Q96KH6 178 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 PBDC1Q9BVG4 233 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 TMEM222Q9H0R3 208 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 PLXNB1O43157 2135 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 IGLV3-1P01715 115 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 EGR1P18146 543 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 DLK1P80370 383 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 ZNF429Q86V71 674 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 WFIKKN1Q96NZ8 548 aa12.88□□□□□ -0.35
EFNB1-201ENST00000204961 METTL1Q9UBP6 276 aaKnown RBP12.88□□□□□ -0.35
EFNB1-201ENST00000204961 CEBPZOSA8MTT3 80 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 DEGS1O15121 323 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 HNF1AP20823 631 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 SRSF6Q13247 344 aaKnown RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 EDDM3AQ14507 147 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 LRP11Q86VZ4 500 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 GPR146Q96CH1 333 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 RPUSD4Q96CM3 377 aaKnown RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 TCEAL7Q9BRU2 100 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 TMEM204Q9BSN7 226 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 TREM2Q9NZC2 230 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 COLQQ9Y215 455 aaPredicted RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 WSB1Q9Y6I7 421 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 YLPM1P49750 1951 aaKnown RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 CLDN1O95832 211 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 FABP6P51161 128 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 PCBD1P61457 104 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 PCED1AQ9H1Q7 454 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 COL6A6A6NMZ7 2263 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 MT-CO3P00414 261 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 IFNA17P01571 189 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 CXCL1P09341 107 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 RPS23P62266 143 aaKnown RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 M1APQ8TC57 530 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 NUDT16L1Q9BRJ7 211 aaKnown RBP12.87□□□□□ -0.35
EFNB1-201ENST00000204961 DCTN5Q9BTE1 182 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 OR2J1Q9GZK6 312 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 WDR54Q9H977 334 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 POMT1Q9Y6A1 747 aa12.87□□□□□ -0.35
EFNB1-201ENST00000204961 LOC102723996A0A087X1L8 192 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 UBE2L5PA0A1B0GUS4 154 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 YKT6O15498 198 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
EFNB1-201ENST00000204961 RNF122Q9H9V4 155 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
EFNB1-201ENST00000204961 A0A0U1RQK1 487 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 RPL36A-HNRNPH2H7BZ11 118 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 PGLYRP1O75594 196 aaPredicted RBP12.86□□□□□ -0.35
EFNB1-201ENST00000204961 NXPH2O95156 264 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 LYL1P12980 280 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 DTYMKP23919 212 aa12.86□□□□□ -0.35
EFNB1-201ENST00000204961 APLNRP35414 380 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms