RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 GSKIPQ9P0R6 139 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 KIF25Q9UIL4 384 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 ERRFI1Q9UJM3 462 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 IGKV1D-17A0A075B6S4 117 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 TRAV39A0A0B4J263 110 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 C12orf77C9JDV5 145 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 ABCD4O14678 606 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 TNFAIP6P98066 277 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 BSPH1Q075Z2 132 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 MSMO1Q15800 293 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 SPRNQ5BIV9 151 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 KDF1Q8NAX2 398 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 OR5D13Q8NGL4 314 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 PPP1R35Q8TAP8 253 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 IL1F10Q8WWZ1 152 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 SNX22Q96L94 193 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 OR5AC2Q9NZP5 309 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 METRNQ9UJH8 293 aa12□□□□□ -0.49
RTFDC1-201ENST00000023939 UBE2J1Q9Y385 318 aaPredicted RBP12□□□□□ -0.49
RTFDC1-201ENST00000023939 HSD17B6O14756 317 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 C1QTNF9P0C862 333 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 SFTPCP11686 197 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 F2RP25116 425 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 NUP62P37198 522 aaPredicted RBP11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 AESQ08117 197 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 ADIPOQQ15848 244 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 CR1LQ2VPA4 569 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 SELENOHQ8IZQ5 122 aaKnown RBP11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 OR1S1Q8NH92 325 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 ST8SIA2Q92186 375 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 GALMQ96C23 342 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 PHYHIPLQ96FC7 376 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 WFIKKN1Q96NZ8 548 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 ARPC5LQ9BPX5 153 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 RNF7Q9UBF6 113 aa11.99□□□□□ -0.49
RTFDC1-201ENST00000023939 PRRC2CQ9Y520 2896 aaKnown RBP11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 CLEC18AA5D8T8 446 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 VSTM5A8MXK1 200 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 HSPA12AO43301 675 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 DEDDO75618 318 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 IGLV2-14P01704 120 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 RLN2P04090 185 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 HOXA4Q00056 320 aaPredicted RBP11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 KRBOX4Q5JUW0 171 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 TMEM268Q5VZI3 342 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 SLC35G3Q8N808 338 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 CLEC18CQ8NCF0 446 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 ZBTB34Q8NCN2 500 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 STOML3Q8TAV4 291 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 PRORYQ9H606 182 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 GCM1Q9NP62 436 aa11.98□□□□□ -0.49
RTFDC1-201ENST00000023939 MGST3O14880 152 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 HBZP02008 142 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 OR4A8P0C604 315 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 CEACAM6P40199 344 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 GABRA2P47869 451 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 SMCO1Q147U7 214 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 NCMAPQ5T1S8 102 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 ZNF695Q8IW36 515 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 ANGPTL6Q8NI99 470 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 FAM216AQ8WUB2 273 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 ABHD14BQ96IU4 210 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 SPIN2AQ99865 258 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 SPIN2BQ9BPZ2 258 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 DNTTIP1Q9H147 329 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 CADP27708 2225 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 SPENQ96T58 3664 aaKnown RBP11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 MBPP02686 304 aaPredicted RBP11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 VDAC1P21796 283 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 CHRNB4P30926 498 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 IL2RGP31785 369 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 GLIPR1P48060 266 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 S100A10P60903 97 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 UNQ6494/PRO21346Q6UXR6 183 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 MEX3BQ6ZN04 569 aaKnown RBP11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 OR4D5Q8NGN0 318 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 OR1L1Q8NH94 360 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 RBPMSQ93062 196 aaKnown RBP11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 SDSLQ96GA7 329 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 ESRP2Q9H6T0 727 aaKnown RBP11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 MED9Q9NWA0 146 aa11.97□□□□□ -0.49
RTFDC1-201ENST00000023939 CHD3Q12873 2000 aaKnown RBP11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 ANKRD34BA5PLL1 514 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 MSGN1A6NI15 193 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 C17orf100A8MU93 164 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 E5RGE8 158 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 C15orf65H3BRN8 121 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 K7EPK0 472 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 K7N7A8 449 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 TAAR5O14804 337 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 SPDEFO95238 335 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 TFF1P04155 84 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 HKR1P10072 659 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 GZMHP20718 246 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 HTD2P86397 168 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 NMSQ5H8A3 153 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 BEX5Q5H9J7 111 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 ALKAL2Q6UX46 152 aa11.96□□□□□ -0.49
RTFDC1-201ENST00000023939 PRR18Q8N4B5 295 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms