RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 C1orf185Q5T7R7 199 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FAM185AQ8N0U4 392 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 HS3ST6Q96QI5 342 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 OCIAD1Q9NX40 245 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 A0A087WWC5 75 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 IGHV5-10-1A0A0J9YXX1 117 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 ZNF816-ZNF321PA0A0X1KG74 233 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 TGOLN2O43493 480 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 HBE1P02100 147 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 CST2P09228 141 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 TRGC1P0CF51 173 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 BCL3P20749 454 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FGF8P55075 233 aaPredicted RBP9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 OR8B8Q15620 311 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 TMEM42Q69YG0 159 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 OR8G5Q8NG78 346 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 OR51H1Q8NH63 302 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FRZBQ92765 325 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 RBMXL1Q96E39 390 aaKnown RBP9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FAM210BQ96KR6 192 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 SIGLEC12Q96PQ1 595 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FOXB1Q99853 325 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 RSG1Q9BU20 258 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 IL36RNQ9UBH0 155 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 FREM2Q5SZK8 3169 aa9.03□□□□□ -0.96
CX3CL1-201ENST00000006053 SLC22A20A6NK97 555 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 RPL36A-HNRNPH2H7BZ11 118 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 CXCL13O43927 109 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 IFNA5P01569 189 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 VDAC1P21796 283 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 EXT1Q16394 746 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 BATFQ16520 125 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 C9orf135Q5VTT2 229 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 NOL4LQ96MY1 436 aaPredicted RBP9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 ATP5SQ99766 215 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF665Q9H7R5 613 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 PTRH2Q9Y3E5 179 aaKnown RBP9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF407Q9C0G0 2248 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 LINC00614P0C842 121 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 SSR4P51571 173 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 TAS2R30P59541 319 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 ID3Q02535 119 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF845Q96IR2 970 aaPredicted RBP9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 OR2H1Q9GZK4 316 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 PROK2Q9HC23 129 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 OR6C6A6NF89 314 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 SRFP11831 508 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 TLE1Q04724 770 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 HNF4GQ14541 408 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 NMSQ5H8A3 153 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 SLC35E3Q7Z769 313 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 PLSCR2Q9NRY7 297 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 IL36GQ9NZH8 169 aa9.02□□□□□ -0.97
CX3CL1-201ENST00000006053 CEP250Q9BV73 2442 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 CCL2P13500 99 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 BAXQ07812 192 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 HERPUD1Q15011 391 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 DAZAP2Q15038 168 aaPredicted RBP9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 C1orf87Q8N0U7 546 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 BEND2Q8NDZ0 799 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 ABHD5Q8WTS1 349 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 VSIRQ9H7M9 311 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 Q9N2K0 584 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 LRFN1Q9P244 771 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 A0A0G2JRQ6 117 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 CBY3A6NI87 242 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 C3orf80F5H4A9 247 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 TRAPPC6AO75865 159 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 MMP7P09237 267 aaPredicted RBP9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 PGA5P0DJD9 388 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 IAPPP10997 89 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 GPM6AP51674 278 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 TDGF1P3P51864 188 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 PAX9P55771 341 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 IL24Q13007 206 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 ZNF880Q6PDB4 577 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 OR56B2PQ8NGI1 322 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 PLPPR1Q8TBJ4 325 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 SCGB1C1Q8TD33 95 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 RNASE8Q8TDE3 154 aaKnown RBP9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 SNX22Q96L94 193 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 RPRMQ9NS64 109 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 GAB2Q9UQC2 676 aa9.01□□□□□ -0.97
CX3CL1-201ENST00000006053 SIAH2O43255 324 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 UCP1P25874 307 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 CEACAM6P40199 344 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 RPL29P47914 159 aaKnown RBP9□□□□□ -0.97
CX3CL1-201ENST00000006053 RAC3P60763 192 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 NCR3LG1Q68D85 454 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 MRPL14Q6P1L8 145 aaKnown RBP9□□□□□ -0.97
CX3CL1-201ENST00000006053 LRP11Q86VZ4 500 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 RPS19BP1Q86WX3 136 aaKnown RBP9□□□□□ -0.97
CX3CL1-201ENST00000006053 CPT1CQ8TCG5 803 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 FAM122AQ96E09 287 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 TAAR3PQ9P1P4 343 aa9□□□□□ -0.97
CX3CL1-201ENST00000006053 MRPS18CQ9Y3D5 142 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms