RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF273Q14593 569 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 BTNL3Q6UXE8 466 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 TCF23Q7RTU1 214 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 TRAPPC6BQ86SZ2 158 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 HOGA1Q86XE5 327 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 C11orf42Q8N5U0 333 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 OR10A7Q8NGE5 316 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 SETD6Q8TBK2 473 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 MRGPRDQ8TDS7 321 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 TMEM186Q96B77 213 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 COX4I2Q96KJ9 171 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 ZNF714Q96N38 554 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 ST6GALNAC5Q9BVH7 336 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 GAL3ST2Q9H3Q3 398 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 LINC00574Q9H8X3 128 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 AKIP1Q9NQ31 210 aa10.14□□□□□ -0.79
LINC00339-213ENST00000642137 TRAV39A0A0B4J263 110 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 KBTBD11-OT1A0A1B0GTJ5 212 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 hCG_1809904A0A1W2PP81 198 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 A0A1W2PPE2 198 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 A0A1W2PR64 198 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 A0A1W2PRV1 198 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 TRDCB7Z8K6 153 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 NPIPB11E5RHQ5 1161 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 C15orf65H3BRN8 121 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 RBP4P02753 201 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 GLP1RP43220 463 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 KIR2DS4P43632 304 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 ARF6P62330 175 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 LSAMPQ13449 338 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 KIR2DS1Q14954 304 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 HMGN3Q15651 99 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 ZNF79Q15937 498 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 PYDC2Q56P42 97 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 Q6ZPA2 131 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 GLCCI1Q86VQ1 547 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 KIR3DL3Q8N743 410 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 GDPD1Q8N9F7 314 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 OR52I2Q8NH67 350 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 ARL11Q969Q4 196 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 C18orf12Q96KH6 178 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 TMUB1Q9BVT8 246 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 TAF9BQ9HBM6 251 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 ZNF286AQ9HBT8 521 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 HIF1ANQ9NWT6 349 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 MTFP1Q9UDX5 166 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 ZNF230Q9UIE0 474 aaPredicted RBP10.13□□□□□ -0.79
LINC00339-213ENST00000642137 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 KPTNQ9Y664 436 aa10.13□□□□□ -0.79
LINC00339-213ENST00000642137 FLNBO75369 2602 aaKnown RBP10.12□□□□□ -0.79
LINC00339-213ENST00000642137 C12orf77C9JDV5 145 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 SPINT2O43291 252 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 INHBBP09529 407 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 FOSL1P15407 271 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 CCL3L1P16619 93 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 HLA-DRB3P79483 266 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 DCAF12L2Q5VW00 463 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 HEPN1Q6WQI6 88 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 MFSD4AQ8N468 514 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 GVQW1Q8N7I0 195 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 BEST4Q8NFU0 473 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 OR52M1Q8NGK5 317 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 SMIM4Q8WVI0 70 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 GCDHQ92947 438 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-213ENST00000642137 THAP7Q9BT49 309 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-213ENST00000642137 IFT46Q9NQC8 304 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 CALYQ9NYX4 217 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 IDI2-AS1Q9NZ38 188 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 KLK11Q9UBX7 282 aa10.12□□□□□ -0.79
LINC00339-213ENST00000642137 MEX3AA1L020 520 aaKnown RBP10.11□□□□□ -0.79
LINC00339-213ENST00000642137 MEIS3P1A6NDR6 274 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 J3QLI3 93 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 F2RL2O00254 374 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 CD5LO43866 347 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 DIRAS3O95661 229 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 HBZP02008 142 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 SCTP09683 121 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 CTXN2P0C2S0 81 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 GSTT2P0CG29 244 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 GSTT2BP0CG30 244 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 CD99P14209 185 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 PRTN3P24158 256 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 CD40LGP29965 261 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 RCVRNP35243 200 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 PPP5CP53041 499 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 ACTBP60709 375 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 ACTG1P63261 375 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 HTD2P86397 168 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 DGCR2P98153 550 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 ZNF846Q147U1 533 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 TMEM30BQ3MIR4 351 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 METTL11BQ5VVY1 283 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 OR52W1Q6IF63 320 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 LYSMD2Q8IV50 215 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 Q8N402 240 aa10.11□□□□□ -0.79
LINC00339-213ENST00000642137 Q8N7P7 452 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms