RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 SRYQ05066 204 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 COTL1Q14019 142 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 ACER2Q5QJU3 275 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 IL22RA1Q8N6P7 574 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 MAFAQ8NHW3 353 aaPredicted RBP11.83□□□□□ -0.52
PHGDH-233ENST00000642021 TECTBQ96PL2 329 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 RNF115Q9Y4L5 304 aa11.83□□□□□ -0.52
PHGDH-233ENST00000642021 CLEC18AA5D8T8 446 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF732B4DXR9 585 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 H3BP45 60 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 G0S2P27469 103 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 RAB1AP62820 205 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 ICAM4Q14773 271 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 PCSK4Q6UW60 755 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 CYB561D1Q8N8Q1 229 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 CLEC18CQ8NCF0 446 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 NEK7Q8TDX7 302 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 SPIN2AQ99865 258 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 SPIN2BQ9BPZ2 258 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 SLC25A31Q9H0C2 315 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 PPIHO43447 177 aaKnown RBP11.82□□□□□ -0.52
PHGDH-233ENST00000642021 MRPL33O75394 65 aaKnown RBP11.82□□□□□ -0.52
PHGDH-233ENST00000642021 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-233ENST00000642021 SLC34A2O95436 690 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 FOXO1Q12778 655 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 IGFBP7Q16270 282 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 SSX2Q16385 188 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF295-AS1Q8N0V1 137 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 ZPBPQ9BS86 351 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 OR51M1Q9H341 326 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF552Q9H707 407 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-233ENST00000642021 KIAA1456Q9P272 454 aa11.82□□□□□ -0.52
PHGDH-233ENST00000642021 HSPA12AO43301 675 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 CELA3AP09093 270 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 RPS10P46783 165 aaKnown RBP11.81□□□□□ -0.52
PHGDH-233ENST00000642021 CPNE4Q96A23 557 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-233ENST00000642021 SMDT1Q9H4I9 107 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A10PA6NDY2 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A18PA6NE21 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A16PA6NEW6 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A20PA6NIJ5 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A8PA6NJQ4 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A7PA6NKC0 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A22PA8MWA6 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A12PA8MX19 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A5PA8MXJ8 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A23PA8MXZ1 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 LILRA1O75019 489 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 YIF1AO95070 293 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 SCAF4O95104 1147 aaKnown RBP11.81□□□□□ -0.52
PHGDH-233ENST00000642021 CXCL1P09341 107 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A15PP0C7V4 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A13PP0C7W8 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A14PP0C7W9 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM90A24PP0C7X0 464 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 TAGLN2P37802 199 aaKnown RBP11.81□□□□□ -0.52
PHGDH-233ENST00000642021 SPCS3P61009 180 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 CEACAM21Q3KPI0 293 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 P4HA3Q7Z4N8 544 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 ATP23Q9Y6H3 246 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 URGCP-MRPS24S4R325 110 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 FAM186AA6NE01 2351 aa11.81□□□□□ -0.52
PHGDH-233ENST00000642021 HS3ST1O14792 307 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 EIF2S3P41091 472 aaKnown RBP11.8□□□□□ -0.52
PHGDH-233ENST00000642021 DLK1P80370 383 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 Q6ZRM9 215 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 TUSC5Q8IXB3 177 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 CALHM2Q9HA72 323 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 TCFL5Q9UL49 500 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 IFITM10A6NMD0 228 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 SRSF7Q16629 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
PHGDH-233ENST00000642021 SSX9Q7RTT3 188 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 ZNF429Q86V71 674 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 C1QL4Q86Z23 238 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 ZDHHC23Q8IYP9 409 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 C17orf78Q8N4C9 275 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 CLDND2Q8NHS1 167 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 Q8WTZ3 238 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 PSMF1Q92530 271 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 RDH5Q92781 318 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 GPR146Q96CH1 333 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 TRIOBPQ9H2D6 2365 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 PCSK5Q92824 1860 aa11.8□□□□□ -0.52
PHGDH-233ENST00000642021 KIAA1324LA8MWY0 1029 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 ERVFRD-1P60508 538 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 UBE2KP61086 200 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 ELOBQ15370 118 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 MRPL21Q7Z2W9 205 aaKnown RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TIPARPQ7Z3E1 657 aaKnown RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 OR51H1Q8NH63 302 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 MRPL30Q8TCC3 161 aaKnown RBP11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TCTEX1D2Q8WW35 142 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 DOCK7Q96N67 2140 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 TRAPPC2LH3BP13 241 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 IFNA17P01571 189 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 RAC2P15153 192 aa11.79□□□□□ -0.52
PHGDH-233ENST00000642021 F2RP25116 425 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms