RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 NUP54Q7Z3B4 507 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 TIPARPQ7Z3E1 657 aaKnown RBP5.08□□□□□ -1.6
CASC19-260ENST00000641828 OR4N5Q8IXE1 308 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 H1FOOQ8IZA3 346 aaPredicted RBP5.08□□□□□ -1.6
CASC19-260ENST00000641828 CMTM8Q8IZV2 173 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 C10orf53Q8N6V4 93 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 C12orf76Q8N812 135 aaPredicted RBP5.08□□□□□ -1.6
CASC19-260ENST00000641828 CSNK2A3Q8NEV1 391 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 OR5T1Q8NG75 326 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 OR5D14Q8NGL3 314 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 TMEM37Q8WXS4 190 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 C8orf44Q96CB5 159 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 NUS1Q96E22 293 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 BTF3L4Q96K17 158 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 TSPAN32Q96QS1 320 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 PCGF1Q9BSM1 259 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 ABHD14AQ9BUJ0 271 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 Q9N2K0 584 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 MMP25Q9NPA2 562 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 DECR2Q9NUI1 292 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 LAMP3Q9UQV4 416 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 LRP12Q9Y561 859 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 CLDN16Q9Y5I7 305 aa5.08□□□□□ -1.6
CASC19-260ENST00000641828 USP9XQ93008 2570 aaPredicted RBP5.08□□□□□ -1.6
CASC19-260ENST00000641828 LOC107986453A0A1B0GWG9 222 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 H7C1C5 153 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 SDCBPO00560 298 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 PITX3O75364 302 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 SYNGR4O95473 234 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TYMSP04818 313 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TDGF1P13385 188 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 CEACAM8P31997 349 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 SNU13P55769 128 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 MTCP1P56278 107 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TMEM50BP56557 158 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 UBE2NP61088 152 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 LCN6P62502 163 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 PAFAH1B2P68402 229 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 EWSR1Q01844 656 aaKnown RBP eCLIP5.07□□□□□ -1.6
CASC19-260ENST00000641828 RPL18Q07020 188 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 BATFQ16520 125 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 MAJINQ3KP22 176 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 ZNF440Q8IYI8 595 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 CMTM1Q8IZ96 169 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 ZNF808Q8N4W9 903 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 ARRDC3Q96B67 414 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 BOD1Q96IK1 185 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 CIB3Q96Q77 187 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 NICN1Q9BSH3 213 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 ALKBH7Q9BT30 221 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 LMF2Q9BU23 707 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 ABHD6Q9BV23 337 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 ST6GALNAC5Q9BVH7 336 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 WWTR1Q9GZV5 400 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TMEM106BQ9NUM4 274 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 OR6C3Q9NZP0 311 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 NAT8Q9UHE5 227 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 RCL1Q9Y2P8 373 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 INSL5Q9Y5Q6 135 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TMEM131Q92545 1883 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 MYO7BQ6PIF6 2116 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 IGKV1D-42A0A075B6H8 117 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 CLEC18AA5D8T8 446 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 GPR89AB7ZAQ6 455 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 NPIPB6E9PJ23 425 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 NKX2-8O15522 239 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 SOCS1O15524 211 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 RRP8O43159 456 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 XRCC2O43543 280 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 FOXS1O43638 330 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 YPEL1O60688 119 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TOMM40O96008 361 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 CLEC3BP05452 202 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 GPR89BP0CG08 455 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 EPHA8P29322 1005 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 ZNF93P35789 620 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 GALR1P47211 349 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 TFPI2P48307 235 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 SLC11A1P49279 550 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 GNB2P62879 340 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 ZNF92Q03936 586 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 RUNX2Q13950 521 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 ENDOGQ14249 297 aaKnown RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 NFATC4Q14934 902 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 RTL6Q6ICC9 239 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 WBP2NLQ6ICG8 309 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 INO80CQ6PI98 192 aaPredicted RBP5.07□□□□□ -1.6
CASC19-260ENST00000641828 C16orf82Q7Z2V1 217 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 CLEC18CQ8NCF0 446 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 OR2L3Q8NG85 312 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 OR2AJ1Q8NGZ0 328 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 OR52N5Q8NH56 324 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 SDSLQ96GA7 329 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 WDYHV1Q96HA8 205 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 YPEL2Q96QA6 119 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 AGMATQ9BSE5 352 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 VAMP8Q9BV40 100 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 PLEKHF2Q9H8W4 249 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 FUT9Q9Y231 359 aa5.07□□□□□ -1.6
CASC19-260ENST00000641828 OR1A2Q9Y585 309 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms