RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GNMTQ14749 295 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 OR8G1Q15617 311 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 ACSF3Q4G176 576 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-211ENST00000641213 C1orf162Q8NEQ5 155 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-211ENST00000641213 ZNF891A8MT65 544 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-211ENST00000641213 TNFSF12O43508 249 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 NXPH2O95156 264 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 GRPP07492 148 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 HOXC12P31275 282 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 NHLH2Q02577 135 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 ZNF273Q14593 569 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 ZNF497Q6ZNH5 498 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 TAAR6Q96RI8 345 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 SPIN2AQ99865 258 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 SPIN2BQ9BPZ2 258 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 PLSCR4Q9NRQ2 329 aa14.46□□□□□ -0.09
PHGDH-211ENST00000641213 ERRFI1Q9UJM3 462 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-211ENST00000641213 TRAV39A0A0B4J263 110 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 DUXBA0A1W2PPF3 345 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 H0Y980 276 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 ADAM20O43506 726 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 ATG12O94817 140 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 ADCYAP1P18509 176 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 NKX2-1P43699 371 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-211ENST00000641213 BLOC1S1P78537 153 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 ZNF146Q15072 292 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 NMSQ5H8A3 153 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 MOB1BQ7L9L4 216 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 OR5D13Q8NGL4 314 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 IL1F10Q8WWZ1 152 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 OR1A1Q9P1Q5 309 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 TINAGQ9UJW2 476 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 ASPMQ8IZT6 3477 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 SVILO95425 2214 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 BORCS7-ASMTA0A0B4J1R7 106 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 CLEC18AA5D8T8 446 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 TMEM210A6NLX4 147 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 NPIPB11E5RHQ5 1161 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 NUPL2O15504 423 aaKnown RBP14.45□□□□□ -0.1
PHGDH-211ENST00000641213 SHEQ5VZ18 495 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 BTNL8Q6UX41 500 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 CLEC18CQ8NCF0 446 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 DKK4Q9UBT3 224 aa14.45□□□□□ -0.1
PHGDH-211ENST00000641213 AHRRA9YTQ3 701 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 SH2D1BO14796 132 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 MLNRO43193 412 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 WDR1O75083 606 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 VDAC1P21796 283 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 F2RP25116 425 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 CAV2P51636 162 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 CXorf67Q86X51 503 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-211ENST00000641213 GINS3Q9BRX5 216 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 NKX6-2Q9C056 277 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-211ENST00000641213 TMEM231Q9H6L2 316 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 OBP2BQ9NPH6 170 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 PARP11Q9NR21 331 aa14.44□□□□□ -0.1
PHGDH-211ENST00000641213 CHD3Q12873 2000 aaKnown RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ACAA1P09110 424 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 POLR2GP62487 172 aaKnown RBP eCLIP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 CXorf66Q5JRM2 361 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 C10orf91Q5T1B1 145 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ZADH2Q8N4Q0 377 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ZNF610Q8N9Z0 462 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 OR8G5Q8NG78 346 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 OR10V1Q8NGI7 309 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 IL22RA2Q969J5 263 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 TSNAXQ99598 290 aaKnown RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 TREM1Q9NP99 234 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 PURGQ9UJV8 347 aaKnown RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 TRAPPC2LQ9UL33 140 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ZNF292O60281 2723 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 DNASE2O00115 360 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 TNFSF13O75888 250 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 SEC11BP0C7V7 166 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 CECR9P0C854 216 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 S100GP29377 79 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 EWSR1Q01844 656 aaKnown RBP eCLIP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 TCF15Q12870 199 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ZNF169Q14929 603 aaPredicted RBP14.43□□□□□ -0.1
PHGDH-211ENST00000641213 Q6ZRG5 221 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 OR2C3Q8N628 320 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 ABHD14BQ96IU4 210 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 HES4Q9HCC6 221 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 UQCC1Q9NVA1 299 aa14.43□□□□□ -0.1
PHGDH-211ENST00000641213 FAM24AA6NFZ4 105 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 TESK1Q15569 626 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 GUCA2BQ16661 112 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 C11orf53Q8IXP5 236 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 PRR18Q8N4B5 295 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 STARD4Q96DR4 205 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 MAGT1Q9H0U3 335 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 OPN3Q9H1Y3 402 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-211ENST00000641213 FAM212BQ9NTI7 297 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-211ENST00000641213 FAM96BQ9Y3D0 163 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 WIPI2Q9Y4P8 454 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 DSPP15924 2871 aaKnown RBP14.42□□□□□ -0.1
PHGDH-211ENST00000641213 CFAP47Q6ZTR5 3102 aa14.42□□□□□ -0.1
PHGDH-211ENST00000641213 SPENQ96T58 3664 aaKnown RBP14.42□□□□□ -0.1
PHGDH-211ENST00000641213 F8W036 122 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms