RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 METRNQ9UJH8 293 aa12.82□□□□□ -0.36
CLN6-219ENST00000637329 A0A0A6YYJ9 748 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 A0A1W2PPR1 153 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 SDCBPO00560 298 aaPredicted RBP12.81□□□□□ -0.36
CLN6-219ENST00000637329 NDUFA2O43678 99 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 RLN1P04808 185 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 P2RX3P56373 397 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 OR5T2Q8NGG2 359 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 ZNF2Q9BSG1 426 aaPredicted RBP12.81□□□□□ -0.36
CLN6-219ENST00000637329 UBTD1Q9HAC8 227 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 KCNIP1Q9NZI2 227 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 KIF25Q9UIL4 384 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 VSIG4Q9Y279 399 aa12.81□□□□□ -0.36
CLN6-219ENST00000637329 MEIKINA0A087WXM9 373 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 HMX3A6NHT5 357 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 CREBL2O60519 120 aaPredicted RBP12.8□□□□□ -0.36
CLN6-219ENST00000637329 RCC1P18754 421 aaPredicted RBP12.8□□□□□ -0.36
CLN6-219ENST00000637329 ANXA7P20073 488 aaKnown RBP12.8□□□□□ -0.36
CLN6-219ENST00000637329 UCP3P55916 312 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 HERV-K104P61576 105 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 RRAS2P62070 204 aaPredicted RBP12.8□□□□□ -0.36
CLN6-219ENST00000637329 AESQ08117 197 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 HERPUD1Q15011 391 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 FAM201AQ5SY85 155 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 SLC36A1Q7Z2H8 476 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 AKAP14Q86UN6 197 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 SLC25A42Q86VD7 318 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 TGIF2LYQ8IUE0 185 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 MARCH1Q8TCQ1 289 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 MOB3AQ96BX8 217 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 LURAP1Q96LR2 239 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 FXYD6Q9H0Q3 95 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 RAB9BQ9NP90 201 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 DCAF16Q9NXF7 216 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 KAAG1Q9UBP8 84 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 SLC23A1Q9UHI7 598 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 GPR132Q9UNW8 380 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 MAB21L2Q9Y586 359 aa12.8□□□□□ -0.36
CLN6-219ENST00000637329 HRNRQ86YZ3 2850 aaPredicted RBP12.79□□□□□ -0.36
CLN6-219ENST00000637329 DYSFO75923 2080 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 TRBV6-7A0A0A0MS04 114 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 ODAMA1E959 279 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 OR5H14A6NHG9 310 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 RP2O75695 350 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 TUSC2O75896 110 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 GYPAP02724 150 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 TFF1P04155 84 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 SCTP09683 121 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 CR1LQ2VPA4 569 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 CD276Q5ZPR3 534 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 ZNF626Q68DY1 528 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 TMED4Q7Z7H5 227 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 TMEM185AQ8NFB2 350 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 DACT3Q96B18 629 aaPredicted RBP12.79□□□□□ -0.36
CLN6-219ENST00000637329 NEURL2Q9BR09 285 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 OR51J1Q9H342 316 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 OR6C3Q9NZP0 311 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
CLN6-219ENST00000637329 ARFGEF3Q5TH69 2177 aa12.79□□□□□ -0.36
CLN6-219ENST00000637329 OTOGQ6ZRI0 2925 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 SETD2Q9BYW2 2564 aaPredicted RBP12.78□□□□□ -0.36
CLN6-219ENST00000637329 IGKV1-6A0A0C4DH72 117 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 BET1O15155 118 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 CLDN1O95832 211 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 PPYP01298 95 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 CTSDP07339 412 aaPredicted RBP12.78□□□□□ -0.36
CLN6-219ENST00000637329 OR4E1P0C645 316 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 PGAM2P15259 253 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 FCGR2CP31995 323 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 NPY4RP50391 375 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 CBX3Q13185 183 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 MUC20Q8N307 709 aaPredicted RBP12.78□□□□□ -0.36
CLN6-219ENST00000637329 ZNRF1Q8ND25 227 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 FAM216AQ8WUB2 273 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 C14orf79Q96F83 325 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 ZNF486Q96H40 463 aaPredicted RBP12.78□□□□□ -0.36
CLN6-219ENST00000637329 LPAR3Q9UBY5 353 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 LAMP3Q9UQV4 416 aa12.78□□□□□ -0.36
CLN6-219ENST00000637329 C12orf77C9JDV5 145 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 TNFRSF13BO14836 293 aaPredicted RBP12.77□□□□□ -0.37
CLN6-219ENST00000637329 TMPRSS2O15393 492 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 SPINT2O43291 252 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 IGHV2-70P01814 119 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 ZNF728P0DKX0 622 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 VSIG10L2P0DP72 767 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 GZMHP20718 246 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 GLIPR1P48060 266 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 EDDM3AQ14507 147 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 C4orf46Q504U0 113 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 TMEM128Q5BJH2 165 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 LPCAT3Q6P1A2 487 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 H1FOOQ8IZA3 346 aaPredicted RBP12.77□□□□□ -0.37
CLN6-219ENST00000637329 SLC38A6Q8IZM9 456 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 FAM216BQ8N7L0 139 aa12.77□□□□□ -0.37
CLN6-219ENST00000637329 DEFB108BQ8NET1 73 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms