RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 FAM3BP58499 235 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 ADIRFQ15847 76 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 C17orf78Q8N4C9 275 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 LMX1AQ8TE12 382 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 ZPBPQ9BS86 351 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 METTL7AQ9H8H3 244 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 RNF115Q9Y4L5 304 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 SHANK1Q9Y566 2161 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 M0R143 59 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 JMJD7P0C870 316 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 PAX9P55771 341 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 WDR25Q64LD2 544 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 FOXL2NBQ6ZUU3 175 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 PLPPR1Q8TBJ4 325 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 IL22RA2Q969J5 263 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 AGMATQ9BSE5 352 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 PSMG3Q9BT73 122 aaPredicted RBP13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 WNT16Q9UBV4 365 aa13.4□□□□□ -0.26
CACNA1A-235ENST00000637004 PIGBOS1A0A0B4J2F0 54 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 MARCH11A6NNE9 402 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 HLA-HP01893 362 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 TUBG1P23258 451 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 IDH3GP51553 393 aaPredicted RBP13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 HNRNPKP61978 463 aaKnown RBP eCLIP13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 MRPS34P82930 218 aaKnown RBP13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 PAX5Q02548 391 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 TMEM241Q24JQ0 296 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 NKAIN1Q4KMZ8 207 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 CYP2G1PQ6ZSU1 146 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 C16orf82Q7Z2V1 217 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 TMEM170AQ8WVE7 144 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 NABP1Q96AH0 204 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 SMIM7Q9BQ49 75 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 Q9N2K0 584 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 PRSS50Q9UI38 385 aa13.4□□□□□ -0.27
CACNA1A-235ENST00000637004 THADAQ6YHU6 1953 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 IGKV1-12A0A0C4DH73 117 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 IGKV1D-12P01611 117 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 RAB35Q15286 201 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 OR51G1Q8NGK1 321 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 RAB40CQ96S21 281 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 SNHG12Q9BXW3 62 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 PTPRZ1P23471 2315 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 H7BYZ3 331 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 NRASP01111 189 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 GNG10P50151 68 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 SERF2P84101 59 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 ACOT6Q3I5F7 207 aaPredicted RBP13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 MRPL41Q8IXM3 137 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 GAPTQ8N292 157 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 OR5D13Q8NGL4 314 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 OR2AE1Q8NHA4 323 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 ATG101Q9BSB4 218 aa13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 RBM24Q9BX46 236 aaKnown RBP13.39□□□□□ -0.27
CACNA1A-235ENST00000637004 TMEM238LA0A1B0GVL6 79 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 DHHO43323 396 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 NXPH3O95157 252 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 GALR1P47211 349 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 ERVFC1-1P60608 527 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 BSXQ3C1V8 233 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 ZNF818PQ6ZRF7 136 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 UBALD2Q8IYN6 164 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 DTD1Q8TEA8 209 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 NAT6Q93015 286 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 TMEM54Q969K7 222 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 RSG1Q9BU20 258 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 A0A1W2PPC4 97 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 CD55P08174 381 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 FGF8P55075 233 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 RBM11P57052 281 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 PMS2P11Q13670 270 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 P2RY6Q15077 328 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 RSPO4Q2I0M5 234 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 Q6ZPA2 131 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 Q6ZS49 121 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 NFAM1Q8NET5 270 aaPredicted RBP13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 R3HDM4Q96D70 268 aa13.38□□□□□ -0.27
CACNA1A-235ENST00000637004 M0R296 226 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 OR7C1O76099 320 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 RPS18P62269 152 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 ZNF726P1Q15940 193 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 OR2M3Q8NG83 312 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 PINX1Q96BK5 328 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 TAAR3PQ9P1P4 343 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 NCOA6Q14686 2063 aaPredicted RBP13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 TRBV11-1A0A0K0K1C0 115 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 H0Y980 276 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 PIAS2O75928 621 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 CNOT4O95628 575 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 FGF5P12034 268 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 MDH2P40926 338 aaKnown RBP13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 FUT6P51993 359 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 ERVS71-1P61550 626 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 TMEM42Q69YG0 159 aa13.37□□□□□ -0.27
CACNA1A-235ENST00000637004 CENPVQ7Z7K6 275 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms