RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 OR1A1Q9P1Q5 309 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 POLR3KQ9Y2Y1 108 aaPredicted RBP6.96□□□□□ -1.3
CDKL5-209ENST00000635828 AUP1Q9Y679 476 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 NAPSAO96009 420 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 RAB6AP20340 208 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 GZMKP49863 264 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 GNG10P50151 68 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 NPY4RP50391 375 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 PLA1AQ53H76 456 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 UBE2NLQ5JXB2 153 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 CNIH2Q6PI25 160 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 LDLRAD3Q86YD5 345 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 OR56B1Q8NGI3 324 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 MCFD2Q8NI22 146 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 C8orf46Q8TAG6 207 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 KIRREL1Q96J84 757 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF714Q96N38 554 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 FAM234AQ9H0X4 552 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 RHOFQ9HBH0 211 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 ABRACLQ9P1F3 81 aa6.96□□□□□ -1.3
CDKL5-209ENST00000635828 FAM25AB3EWG3 89 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 FAM25CB3EWG5 89 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 FAM25GB3EWG6 89 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 LANCL1O43813 399 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 HEXAP06865 529 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 LIPFP07098 398 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF728P0DKX0 622 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 TAS2R20P59543 309 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 TAF9BQ9HBM6 251 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 EXTL2Q9UBQ6 330 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 KLK11Q9UBX7 282 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 NOL3O60936 208 aaKnown RBP6.95□□□□□ -1.3
CDKL5-209ENST00000635828 GSTT2P0CG29 244 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 GSTT2BP0CG30 244 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 IGHV1-8P0DP01 117 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 TNFSF8P32971 234 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 RAB13P51153 203 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 OR5D13Q8NGL4 314 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ARL11Q969Q4 196 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 AJUBAQ96IF1 538 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 CMSS1Q9BQ75 279 aaKnown RBP6.95□□□□□ -1.3
CDKL5-209ENST00000635828 SUCNR1Q9BXA5 334 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ABCG5Q9H222 651 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF286AQ9HBT8 521 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 CHMP1AQ9HD42 196 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-209ENST00000635828 TNFRSF19Q9NS68 423 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 CALYQ9NYX4 217 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF69Q9UC07 566 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 SMIM31A0A1B0GVY4 71 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
CDKL5-209ENST00000635828 FCGR3AP08637 254 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 CD24P25063 80 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 TMEM69Q5SWH9 247 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 FAAP20Q6NZ36 180 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
CDKL5-209ENST00000635828 KCNS2Q9ULS6 477 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 DNHD1Q96M86 4753 aa6.95□□□□□ -1.3
CDKL5-209ENST00000635828 TRAV20A0A0B4J274 112 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 HBZP02008 142 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 PPP1CCP36873 323 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 LOXL3P58215 753 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 HACD4Q5VWC8 232 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 SLC35E4Q6ICL7 350 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 BTNL3Q6UXE8 466 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 GAPTQ8N292 157 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 SNAPC3Q92966 411 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 NXF2Q9GZY0 626 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 CCDC59Q9P031 241 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 LINC00312Q9Y6C7 94 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 TMEM30CPA0ZSE6 113 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 XRCC3O43542 346 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 ARFRP1Q13795 201 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 RBM39Q14498 530 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 MRI1Q9BV20 369 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 ETV7Q9Y603 341 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 TRGV10A0A0A0MS01 117 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 KBTBD11-OT1A0A1B0GTJ5 212 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 METTL21EPA6NDL7 271 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 C17orf98A8MV24 154 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 ERP29P30040 261 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 SOX6P35712 828 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 DGCR2P98153 550 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 CD276Q5ZPR3 534 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 PTX4Q96A99 478 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 S100A16Q96FQ6 103 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 PCDHB16Q9NRJ7 776 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 MBNL3Q9NUK0 354 aaKnown RBP6.94□□□□□ -1.3
CDKL5-209ENST00000635828 HSF4Q9ULV5 492 aa6.94□□□□□ -1.3
CDKL5-209ENST00000635828 A0A0U1RQK1 487 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 hADV38S2A0JD32 116 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A10PA6NDY2 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A18PA6NE21 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A16PA6NEW6 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A20PA6NIJ5 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A8PA6NJQ4 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A7PA6NKC0 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A22PA8MWA6 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A12PA8MX19 464 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms