RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 TIMM23BQ5SRD1 257 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 OTPQ5XKR4 325 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF66Q6ZN08 573 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 IL17RELQ6ZVW7 336 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 ADGRE4PQ86SQ3 457 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF611Q8N823 705 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 RDH5Q92781 318 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SMIM8Q96KF7 97 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 DUSP23Q9BVJ7 150 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 COA1Q9GZY4 146 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 Q9N2K0 584 aa3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 FGF20Q9NP95 211 aaPredicted RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 SF3B6Q9Y3B4 125 aaKnown RBP3.4□□□□□ -1.87
R3HDM1-220ENST00000628915 FOXI3A8MTJ6 420 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 FABP5P3A8MUU1 101 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 CHST1O43916 411 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 PRKNO60260 465 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BKO60814 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 KLK1P06870 262 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BJP06899 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 THBDP07204 575 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HKR1P10072 659 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GPX2P18283 190 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BOP23527 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BBP33778 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GPR6P46095 362 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SMIM11AP58511 58 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BDP58876 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 TAS2R20P59543 309 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 RPS14P62263 151 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BCP62807 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GRB2P62993 217 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 FOXL1Q12952 345 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 KLF9Q13886 244 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 PSG5Q15238 335 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST2H2BEQ16778 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SPATA45Q537H7 98 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF385BQ569K4 471 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ACTL10Q5JWF8 245 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 PTCRAQ6ISU1 281 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GLIPR1L1Q6UWM5 242 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 KCNRGQ8N5I3 272 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 LILRA3Q8N6C8 439 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 IL22RA1Q8N6P7 574 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR52L1Q8NGH7 329 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR52E2Q8NGJ4 325 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF502Q8TBZ5 544 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 CLEC4CQ8WTT0 213 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 TMEM171Q8WVE6 324 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GEMIN6Q8WXD5 167 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR5P3Q8WZ94 311 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BHQ93079 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR10C1Q96KK4 312 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BNQ99877 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2BMQ99879 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 RASL11BQ9BPW5 248 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SPANXCQ9NY87 97 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 NUDT4Q9NZJ9 180 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ABRACLQ9P1F3 81 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MYO10Q9HD67 2058 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A096LPE4 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 A0A1W2PPZ6 126 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 CHRM4P08173 479 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H1CP16403 213 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 PRTN3P24158 256 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF140P52738 457 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HMGA2P52926 109 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GAGE2EQ4V326 116 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 PEAR1Q5VY43 1037 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MRPL54Q6P161 138 aaKnown RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ANKRD16Q6P6B7 361 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 PRSS54Q6PEW0 395 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 FBXW12Q6X9E4 464 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HAPLN4Q86UW8 402 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GALNT16Q8N428 558 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 NUP43Q8NFH3 380 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 OR2K2Q8NGT1 345 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SMIM4Q8WVI0 70 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SCAMP4Q969E2 229 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SEC22AQ96IW7 307 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 HIST1H2AAQ96QV6 131 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 C19orf24Q9BVV8 132 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SLC25A39Q9BZJ4 359 aaPredicted RBP3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 DEFB129Q9H1M3 183 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SYNPO2LQ9H987 977 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 GAGE2DQ9UEU5 116 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 TRAV24A0A0B4J272 114 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 CCL15-CCL14A0A0B4J2E2 113 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MEIS3P1A6NDR6 274 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 ZNF840PA6NDX5 716 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 SIRPB1O00241 398 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 CLDN5O00501 218 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MPPED1O15442 326 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 RAMP2O60895 175 aa3.39□□□□□ -1.87
R3HDM1-220ENST00000628915 MT-ND6P03923 174 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms