RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PDCD6O75340 191 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 DUS4LO95620 317 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 THBDP07204 575 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 TPT1P13693 172 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 RPS2P15880 293 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 OTX1P32242 354 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 GUSBP1Q15486 140 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 VAX1Q5SQQ9 334 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZNF660Q6AZW8 331 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 MARS2Q96GW9 593 aaKnown RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZNF2Q9BSG1 426 aaPredicted RBP10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 C12orf4Q9NQ89 552 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 MED9Q9NWA0 146 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 V9GYS6 101 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 ABCA12Q86UK0 2595 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 MFSD2BA6NFX1 497 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 DBX1A6NMT0 343 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 H0YL77 283 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 HOXB5P09067 269 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 RPA2P15927 270 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 CD80P33681 288 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 SIGIRRQ6IA17 410 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 TMEM65Q6PI78 240 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 ACOT7LQ6ZUV0 252 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 OR5M8Q8NGP6 311 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 SCARB1Q8WTV0 552 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 TRAV38-1A0A0B4J264 116 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 A0A1W2PP11 408 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 CRYZL1O95825 349 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 PSMB6P28072 239 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 CDSNQ15517 529 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 FAM185AQ8N0U4 392 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 FAM169BQ8N8A8 192 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 PXT1Q8NFP0 134 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
SYNGAP1-207ENST00000628646 IGHV1-69-2A0A0G2JMI3 117 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 LYNX1G3V0Z9 82 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 NDUFB3O43676 98 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 C1QL1O75973 258 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 LYNX1P0DP58 116 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 DTYMKP23919 212 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 RAB2AP61019 212 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZNF672Q499Z4 452 aaPredicted RBP10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 HOGA1Q86XE5 327 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 Q8IYB0 196 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 LGI3Q8N145 548 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZFHX4Q86UP3 3567 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 C9orf170A2RU37 121 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 CEACAM18A8MTB9 384 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 SDCBPO00560 298 aaPredicted RBP10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 CYB5R3P00387 301 aaPredicted RBP10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 ADIPOQQ15848 244 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZNF695Q8IW36 515 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 OCSTAMPQ9BR26 566 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 HECTD1Q9ULT8 2610 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 PPIAL4EA0A075B759 164 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 LRP5LA4QPB2 252 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 TMEM210A6NLX4 147 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 PPIAL4DF5H284 164 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 SPDEFO95238 335 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 PPIAL4FP0DN26 164 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 UBE2V2Q15819 145 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 PPIAL4AQ9Y536 164 aa10.57□□□□□ -0.72
SYNGAP1-207ENST00000628646 FAM221AA4D161 298 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 ZSCAN5BA6NJL1 495 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 LRRC10Q5BKY1 277 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 C1QL2Q7Z5L3 287 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 FAM89BQ8N5H3 189 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 ADAD2Q8NCV1 583 aaKnown RBP10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 RAB9BQ9NP90 201 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 ASPMQ8IZT6 3477 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 ATG12O94817 140 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 IL2RGP31785 369 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 TESK1Q15569 626 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 MEGF10Q96KG7 1140 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 RAB18Q9NP72 206 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 TEX46H3BTG2 121 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 SFT2D2O95562 160 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 PPP1R1AQ13522 171 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 POLQO75417 2590 aa10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 USP9YO00507 2555 aaPredicted RBP10.56□□□□□ -0.72
SYNGAP1-207ENST00000628646 IQCF6A8MYZ5 107 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 MFNGO00587 321 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 SYNGR1O43759 233 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 IGLV1-44P01699 117 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 BCL3P20749 454 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 ARHGDIBP52566 201 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 BRICD5Q6PL45 260 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 OR1S1Q8NH92 325 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 MITD1Q8WV92 249 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 C2orf50Q96LR7 162 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 BOD1L1Q8NFC6 3051 aa10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 USP9XQ93008 2570 aaPredicted RBP10.55□□□□□ -0.72
SYNGAP1-207ENST00000628646 RNF222A6NCQ9 220 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms