RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 TRAPPC3O43617 180 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 ENTPD6O75354 484 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 TNFSF15O95150 251 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 CXorf1O96002 111 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 APODP05090 189 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 SEC11BP0C7V7 166 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 UBCP0CG48 685 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 PTMSP20962 102 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 GSTM3P21266 225 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 GABRR2P28476 465 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 FOXA1P55317 472 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 ARPP19P56211 112 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 SRSF6Q13247 344 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 ITGB3BPQ13352 177 aaPredicted RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 CUL2Q13617 745 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 TSC22D1Q15714 1073 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 TMPPEQ6ZT21 453 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 BZW1Q7L1Q6 419 aaKnown RBP1.2□□□□□ -2.22
VBP1-204ENST00000625964 TMEM144Q7Z5S9 345 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 APRG1Q8IVJ8 170 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 ITPRIPQ8IWB1 547 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 CMTM8Q8IZV2 173 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 OR2M7Q8NG81 312 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 APH1AQ96BI3 265 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 Q96MT0 163 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 NRBP2Q9NSY0 501 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 CCL26Q9Y258 94 aa1.2□□□□□ -2.22
VBP1-204ENST00000625964 POLEQ07864 2286 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 PLXNB1O43157 2135 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 MAP1AP78559 2803 aaPredicted RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 MYH8P13535 1937 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 MYH4Q9Y623 1939 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 DIDO1Q9BTC0 2240 aaKnown RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 CTAGE15A4D2H0 777 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 I3L4J1 428 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 OVOL1O14753 267 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 YKT6O15498 198 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 UPK1BO75841 260 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 GP1BAP07359 652 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 LIPCP11150 499 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 TUFMP49411 452 aaKnown RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 KRTAP12-1P59990 96 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 TRDNQ13061 729 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 RPEL1Q2QD12 228 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 NDUFAF7Q7L592 441 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 CTAGE6Q86UF2 777 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 BBS5Q8N3I7 341 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 EIF4E3Q8N5X7 224 aaKnown RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 FAM57AQ8TBR7 257 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 CA5BP1Q8WTZ4 195 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 TSEN15Q8WW01 171 aaKnown RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 GABRG3Q99928 467 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 AGMATQ9BSE5 352 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 ELOVL6Q9H5J4 265 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 CYP3A43Q9HB55 503 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 TGP01266 2768 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 TNRC6BQ9UPQ9 1833 aaKnown RBP1.19□□□□□ -2.22
VBP1-204ENST00000625964 ANK2Q01484 3957 aa1.19□□□□□ -2.22
VBP1-204ENST00000625964 WNK1Q9H4A3 2382 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 NSD1Q96L73 2696 aaPredicted RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 PRRC2CQ9Y520 2896 aaKnown RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 MYO18AQ92614 2054 aaKnown RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 MXRA5Q9NR99 2828 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 PTPRDP23468 1912 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 MYLKQ15746 1914 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 IGKV1OR2-108A0A075B7D4 117 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 TRAV8-6A0A0B4J262 113 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 A0A1W2PRD5 423 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 CYTH3O43739 400 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 ZNF73O43830 326 aaPredicted RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 CATP04040 527 aaKnown RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 CDK1P06493 297 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 CTSGP08311 255 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 GFAPP14136 432 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 ZNF708P17019 499 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 HLA-GP17693 338 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 GNRHRP30968 328 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 RPL10AP62906 217 aaKnown RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 EIF3IQ13347 325 aaKnown RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 NUMA1Q14980 2115 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 ALX1Q15699 326 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 BEX5Q5H9J7 111 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 SLC25A45Q8N413 288 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 C8orf31Q8N9H6 132 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 CCDC148Q8NFR7 591 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 SMARCD1Q96GM5 515 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 CPB2Q96IY4 423 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 UBE2E2Q96LR5 201 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 C9orf72Q96LT7 481 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 ZNF75AQ96N20 296 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 CATSPER2Q96P56 530 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 C11orf70Q9BRQ4 267 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 STMN4Q9H169 189 aaPredicted RBP1.18□□□□□ -2.22
VBP1-204ENST00000625964 CXCL16Q9H2A7 254 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 PSTPIP2Q9H939 334 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 RDH14Q9HBH5 336 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 ACOT9Q9Y305 439 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 OR51B2Q9Y5P1 312 aa1.18□□□□□ -2.22
VBP1-204ENST00000625964 ZFC3H1O60293 1989 aaKnown RBP1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms