RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 CCL1P22362 96 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 OR10J1P30954 320 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 BAXQ07812 192 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 SP5Q6BEB4 398 aaPredicted RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 GBGT1Q8N5D6 347 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 MRPL13Q9BYD1 178 aaKnown RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 MAP1LC3BQ9GZQ8 125 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 PNRC2Q9NPJ4 139 aaKnown RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 B3GAT1Q9P2W7 334 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 MRPS18CQ9Y3D5 142 aaKnown RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 IFNA1P01562 189 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 SRPXP78539 464 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 OR2V1Q8NHB1 315 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 LHX4Q969G2 390 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 GRIFINA4D1Z8 144 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 LIPT2A6NK58 231 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 ETV2O00321 342 aaPredicted RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 LINC00614P0C842 121 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 DTYMKP23919 212 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 PMP22Q01453 160 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 DLX2Q07687 328 aaPredicted RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 IL24Q13007 206 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 EXT1Q16394 746 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 TDRG1Q3Y452 100 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 SELENOHQ8IZQ5 122 aaKnown RBP13.1□□□□□ -0.31
PMS1-221ENST00000624204 PP6455Q8WZ26 134 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 SLC7A10Q9NS82 523 aa13.1□□□□□ -0.31
PMS1-221ENST00000624204 KIR2DS5A0A0G2JLQ3 304 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 KIR2DL5BA0A0G2JN68 375 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 A0A0G2JNG1 304 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 KIR2DL5BA0A0G2JPC4 375 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 G3V3Y1 287 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 KIR2DS3K7RE56 304 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 HRASP01112 189 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 LCATP04180 440 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 RPL23P62829 140 aaKnown RBP13.09□□□□□ -0.31
PMS1-221ENST00000624204 KIR2DS5Q14953 304 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 FAM69BQ5VUD6 431 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 KIR2DL5AQ8N109 375 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 FAM103A1Q9BTL3 118 aaKnown RBP13.09□□□□□ -0.31
PMS1-221ENST00000624204 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 SHHQ15465 462 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 TMEM41BQ5BJD5 291 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 DPPA3Q6W0C5 159 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 MRGPRGQ86SM5 289 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 TGIF2LYQ8IUE0 185 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
PMS1-221ENST00000624204 AQP7O14520 342 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 CCNOP22674 350 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 NTSR1P30989 418 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 ENDOGQ14249 297 aaKnown RBP13.09□□□□□ -0.31
PMS1-221ENST00000624204 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 OR8G2PQ6IF36 304 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 GAPTQ8N292 157 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 SLC39A9Q9NUM3 307 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 ALKBH4Q9NXW9 302 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 ST3GAL6Q9Y274 331 aa13.09□□□□□ -0.31
PMS1-221ENST00000624204 TRAV1-1A0A0B4J248 108 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 TNFRSF10CO14798 259 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 GAGE1Q13065 139 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 CYP2G1PQ6ZSU1 146 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 Q6ZVH6 145 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 NUPR1O60356 82 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 BRS3P32247 399 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 PDLIM4P50479 330 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 HIST1H3AP68431 136 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 CCDC74BQ96LY2 380 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 PYGO2Q9BRQ0 406 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 TMEM204Q9BSN7 226 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 PLEK2Q9NYT0 353 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 OR6C3Q9NZP0 311 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 RBM7Q9Y580 266 aaKnown RBP13.08□□□□□ -0.32
PMS1-221ENST00000624204 ADAMTS9Q9P2N4 1935 aa13.08□□□□□ -0.32
PMS1-221ENST00000624204 TRAV39A0A0B4J263 110 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 PDGFBP01127 241 aaPredicted RBP13.07□□□□□ -0.32
PMS1-221ENST00000624204 CD82P27701 267 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
PMS1-221ENST00000624204 MEF2BQ02080 365 aaPredicted RBP13.07□□□□□ -0.32
PMS1-221ENST00000624204 ACTL10Q5JWF8 245 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 FAM78BQ5VT40 261 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 C11orf42Q8N5U0 333 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 OR4F5Q8NH21 305 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 GATAD1Q8WUU5 269 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 IL1F10Q8WWZ1 152 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 SIGLEC12Q96PQ1 595 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 OR4F4Q96R69 305 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 P2RX4Q99571 388 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 DNAJC4Q9NNZ3 241 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ZNF320A2RRD8 509 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 TGFBR3Q03167 851 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ZNF845Q96IR2 970 aaPredicted RBP13.07□□□□□ -0.32
PMS1-221ENST00000624204 OR2J1Q9GZK6 312 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 PARLQ9H300 379 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ASCL3Q9NQ33 180 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms