RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 MRPS28Q9Y2Q9 187 aaKnown RBP12.76□□□□□ -0.37
DDB2-216ENST00000622878 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 TMEM30CPA0ZSE6 113 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 H3BUI4 141 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 MT-ND4P03905 459 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 MAS1P04201 325 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 GZMHP20718 246 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 VDAC2P45880 294 aaPredicted RBP12.75□□□□□ -0.37
DDB2-216ENST00000622878 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 C6orf141Q5SZD1 244 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 UNQ9370/PRO34162Q6UXP9 181 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 THNSL2Q86YJ6 484 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 LYG1Q8N1E2 194 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 GAPTQ8N292 157 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 JAGN1Q8N5M9 183 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 AKR1E2Q96JD6 320 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 CITED2Q99967 270 aaPredicted RBP12.75□□□□□ -0.37
DDB2-216ENST00000622878 VCXQ9H320 206 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 ERGIC3Q9Y282 383 aa12.75□□□□□ -0.37
DDB2-216ENST00000622878 LSM2Q9Y333 95 aaKnown RBP12.75□□□□□ -0.37
DDB2-216ENST00000622878 AMMECR1Q9Y4X0 333 aaPredicted RBP12.75□□□□□ -0.37
DDB2-216ENST00000622878 MNDAP41218 407 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 LOXL3P58215 753 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 MADCAM1Q13477 382 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 INSL4Q14641 139 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 LTC4SQ16873 150 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 ATAD3CQ5T2N8 411 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 NDUFA11Q86Y39 141 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 TMEM104Q8NE00 496 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 OR52M1Q8NGK5 317 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 SGCDQ92629 289 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 RPEQ96AT9 228 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 SPACA1Q9HBV2 294 aa12.74□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A10PA6NDY2 464 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A7PA6NKC0 464 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 FAM90A23PA8MXZ1 464 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 ORC5O43913 435 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 AQP4P55087 323 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 CD83Q01151 205 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 EMX1Q04741 257 aaPredicted RBP12.73□□□□□ -0.37
DDB2-216ENST00000622878 IRF3Q14653 427 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 ABCA11PQ4W5N1 156 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 C1QL4Q86Z23 238 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 NKAIN3Q8N8D7 197 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 CCDC107Q8WV48 283 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 THRSPQ92748 146 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 TOMM40LQ969M1 308 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 ARL11Q969Q4 196 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 CYYR1Q96J86 154 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 UQCC2Q9BRT2 126 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 MND1Q9BWT6 205 aa12.73□□□□□ -0.37
DDB2-216ENST00000622878 A0A1W2PPE3 182 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 SH2D7A6NKC9 451 aaPredicted RBP12.72□□□□□ -0.37
DDB2-216ENST00000622878 PTGES3LE9PB15 166 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 SC5DO75845 299 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
DDB2-216ENST00000622878 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 CD37P11049 281 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 MGMTP16455 207 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 MAPK3P27361 379 aaPredicted RBP12.72□□□□□ -0.37
DDB2-216ENST00000622878 GNG10P50151 68 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 RAB7AP51149 207 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 SLC35A2P78381 396 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 NSUN5P1Q3KNT7 163 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 ACSM3Q53FZ2 586 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 SIGIRRQ6IA17 410 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 RAB12Q6IQ22 244 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 FAM53AQ6NSI3 398 aaPredicted RBP12.72□□□□□ -0.37
DDB2-216ENST00000622878 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 MS4A15Q8N5U1 240 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 LINC00311Q8N616 119 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 DRAM1Q8N682 238 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 OR5AU1Q8NGC0 362 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 OR56B4Q8NH76 319 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 CAPSLQ8WWF8 208 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 Q96M66 194 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 BANF2Q9H503 90 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 GFOD1Q9NXC2 390 aa12.72□□□□□ -0.37
DDB2-216ENST00000622878 C12orf77C9JDV5 145 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 G3V4G9 280 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 M0QZK8 103 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 AIPO00170 330 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 PEX14O75381 377 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 GLAP06280 429 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 LPLP06858 475 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 ZNF816Q0VGE8 651 aaPredicted RBP12.71□□□□□ -0.37
DDB2-216ENST00000622878 SPHARQ15513 63 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 ARSJQ5FYB0 599 aaPredicted RBP12.71□□□□□ -0.37
DDB2-216ENST00000622878 KPRPQ5T749 579 aaPredicted RBP12.71□□□□□ -0.37
DDB2-216ENST00000622878 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 LRRTM1Q86UE6 522 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 OR10X1Q8NGY0 326 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 NEK7Q8TDX7 302 aa12.71□□□□□ -0.37
DDB2-216ENST00000622878 MYDGFQ969H8 173 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms