RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 MIDNQ504T8 468 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 MOB1BQ7L9L4 216 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 MYPOPQ86VE0 399 aaPredicted RBP8.01□□□□□ -1.13
PDPN-212ENST00000621990 MED12LQ86YW9 2145 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 ODF3L1Q8IXM7 274 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 KDF1Q8NAX2 398 aaPredicted RBP8.01□□□□□ -1.13
PDPN-212ENST00000621990 RTL8AQ9BWD3 113 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 C19orf12Q9NSK7 152 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 CLCF1Q9UBD9 225 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 RNF115Q9Y4L5 304 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 KNTC1P50748 2209 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 ARGFXA6NJG6 315 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 PROB1E7EW31 1015 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 K7N7A8 449 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 HSD17B6O14756 317 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 NDUFA2O43678 99 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 POLR2GP62487 172 aaKnown RBP eCLIP8.01□□□□□ -1.13
PDPN-212ENST00000621990 ARG2P78540 354 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 BAXQ07812 192 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 CXorf66Q5JRM2 361 aaPredicted RBP8.01□□□□□ -1.13
PDPN-212ENST00000621990 ZNF497Q6ZNH5 498 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 C17orf78Q8N4C9 275 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 TMEM252Q8N6L7 170 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 OR10J5Q8NHC4 309 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 KPTNQ9Y664 436 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 R4GN57 208 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 HS3ST1O14792 307 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 AGPAT2O15120 278 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 TMEM50AO95807 157 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 IGLV2-14P01704 120 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 ACAA1P09110 424 aaPredicted RBP8.01□□□□□ -1.13
PDPN-212ENST00000621990 ZNF146Q15072 292 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 OR8G5Q8NG78 346 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 TMEM171Q8WVE6 324 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 RDH5Q92781 318 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 SLC25A31Q9H0C2 315 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 HIPK2Q9H2X6 1198 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 TAAR3PQ9P1P4 343 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 POLDIP2Q9Y2S7 368 aa8.01□□□□□ -1.13
PDPN-212ENST00000621990 FAM24AA6NFZ4 105 aa8□□□□□ -1.13
PDPN-212ENST00000621990 C1QTNF9BB2RNN3 333 aa8□□□□□ -1.13
PDPN-212ENST00000621990 H7C2Y5 167 aa8□□□□□ -1.13
PDPN-212ENST00000621990 SLC33A1O00400 549 aaPredicted RBP8□□□□□ -1.13
PDPN-212ENST00000621990 SSSCA1O60232 199 aa8□□□□□ -1.13
PDPN-212ENST00000621990 CNOT4O95628 575 aaKnown RBP8□□□□□ -1.13
PDPN-212ENST00000621990 IGHV1-2P23083 117 aa8□□□□□ -1.13
PDPN-212ENST00000621990 FHITP49789 147 aa8□□□□□ -1.13
PDPN-212ENST00000621990 MRPL49Q13405 166 aaKnown RBP8□□□□□ -1.13
PDPN-212ENST00000621990 PEA15Q15121 130 aa8□□□□□ -1.13
PDPN-212ENST00000621990 OR8G1Q15617 311 aa8□□□□□ -1.13
PDPN-212ENST00000621990 GABRA6Q16445 453 aa8□□□□□ -1.13
PDPN-212ENST00000621990 SP5Q6BEB4 398 aaPredicted RBP8□□□□□ -1.13
PDPN-212ENST00000621990 PIP4P1Q86T03 277 aa8□□□□□ -1.13
PDPN-212ENST00000621990 SCCPDHQ8NBX0 429 aa8□□□□□ -1.13
PDPN-212ENST00000621990 GPHA2Q96T91 129 aa8□□□□□ -1.13
PDPN-212ENST00000621990 MBNL3Q9NUK0 354 aaKnown RBP8□□□□□ -1.13
PDPN-212ENST00000621990 PRELID3BQ9Y3B1 194 aa8□□□□□ -1.13
PDPN-212ENST00000621990 KLF2Q9Y5W3 355 aaPredicted RBP8□□□□□ -1.13
PDPN-212ENST00000621990 LOC400499M0QZD8 3231 aa8□□□□□ -1.13
PDPN-212ENST00000621990 DOCK7Q96N67 2140 aa8□□□□□ -1.13
PDPN-212ENST00000621990 A0A1B0GU03 582 aa8□□□□□ -1.13
PDPN-212ENST00000621990 KIAA1324LA8MWY0 1029 aaPredicted RBP8□□□□□ -1.13
PDPN-212ENST00000621990 CDRT15L2A8MXV6 281 aa8□□□□□ -1.13
PDPN-212ENST00000621990 IQCF6A8MYZ5 107 aa8□□□□□ -1.13
PDPN-212ENST00000621990 UMAD1C9J7I0 102 aa8□□□□□ -1.13
PDPN-212ENST00000621990 CELA3BP08861 270 aa8□□□□□ -1.13
PDPN-212ENST00000621990 PGA5P0DJD9 388 aa8□□□□□ -1.13
PDPN-212ENST00000621990 RAC2P15153 192 aa8□□□□□ -1.13
PDPN-212ENST00000621990 S100GP29377 79 aa8□□□□□ -1.13
PDPN-212ENST00000621990 CAMLGP49069 296 aa8□□□□□ -1.13
PDPN-212ENST00000621990 PPP1CBP62140 327 aa8□□□□□ -1.13
PDPN-212ENST00000621990 TGFBR3Q03167 851 aa8□□□□□ -1.13
PDPN-212ENST00000621990 TESK1Q15569 626 aa8□□□□□ -1.13
PDPN-212ENST00000621990 GUK1Q16774 197 aa8□□□□□ -1.13
PDPN-212ENST00000621990 SPATA46Q5T0L3 261 aa8□□□□□ -1.13
PDPN-212ENST00000621990 LFNGQ8NES3 379 aa8□□□□□ -1.13
PDPN-212ENST00000621990 PARP12Q9H0J9 701 aaKnown RBP8□□□□□ -1.13
PDPN-212ENST00000621990 OR51B6Q9H340 312 aa8□□□□□ -1.13
PDPN-212ENST00000621990 PCNX2A6NKB5 2137 aa8□□□□□ -1.13
PDPN-212ENST00000621990 ZFHX4Q86UP3 3567 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 C1QL1O75973 258 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 OR2H2O95918 312 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 CEACAM1P13688 526 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 NFYBP25208 207 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 PAX9P55771 341 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 ZNF616Q08AN1 781 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 TRIP6Q15654 476 aaKnown RBP7.99□□□□□ -1.13
PDPN-212ENST00000621990 IGFL2Q6UWQ7 119 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 SUMF1Q8NBK3 374 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 HSD17B11Q8NBQ5 300 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 SNIP1Q8TAD8 396 aaKnown RBP7.99□□□□□ -1.13
PDPN-212ENST00000621990 AKR1E2Q96JD6 320 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 SMDT1Q9H4I9 107 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 HES4Q9HCC6 221 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 PRELID1Q9Y255 219 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 WIPI2Q9Y4P8 454 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 A0A1W2PR80 420 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 TMEM210A6NLX4 147 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 TSPAN9O75954 239 aa7.99□□□□□ -1.13
PDPN-212ENST00000621990 HOXB1P14653 301 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms