RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 RCL1Q9Y2P8 373 aaKnown RBP14.88□□□□□ -0.03
FAM3A-222ENST00000621967 LMO1P25800 156 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 GNRHRP30968 328 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 CASP6P55212 293 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 RNPS1Q15287 305 aaKnown RBP14.88□□□□□ -0.03
FAM3A-222ENST00000621967 CEACAM21Q3KPI0 293 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 C1orf185Q5T7R7 199 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 TUSC5Q8IXB3 177 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 SLAMF9Q96A28 289 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 APOBEC3DQ96AK3 386 aaPredicted RBP14.88□□□□□ -0.03
FAM3A-222ENST00000621967 TMEM56Q96MV1 263 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 USB1Q9BQ65 265 aaKnown RBP14.88□□□□□ -0.03
FAM3A-222ENST00000621967 SCRT1Q9BWW7 348 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 RNF122Q9H9V4 155 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 TINAGQ9UJW2 476 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 TMEM56-RWDD3S4R434 201 aa14.88□□□□□ -0.03
FAM3A-222ENST00000621967 DOCK7Q96N67 2140 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 ZNF503-AS2A6NEH8 195 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 TRDCB7Z8K6 153 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 AGPAT2O15120 278 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 HLA-HP01893 362 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 TLE1Q04724 770 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 MPV17LQ2QL34 196 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 DPPA2Q7Z7J5 298 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 DOLPP1Q86YN1 238 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 ZDHHC23Q8IYP9 409 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 BATF2Q8N1L9 274 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 CALHM2Q9HA72 323 aa14.87□□□□□ -0.03
FAM3A-222ENST00000621967 A0A096LPE4 126 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 A0A1W2PPZ6 126 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 C5orf49A4QMS7 147 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 ZNF724A8MTY0 619 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 SNCAP37840 140 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 HAAOP46952 286 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 FOXG1P55316 489 aaPredicted RBP14.86□□□□□ -0.03
FAM3A-222ENST00000621967 FAM76BQ5HYJ3 339 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 MRPL21Q7Z2W9 205 aaKnown RBP14.86□□□□□ -0.03
FAM3A-222ENST00000621967 CFAP46Q8IYW2 2715 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 TUSC2O75896 110 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 NFYBP25208 207 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 RAB5CP51148 216 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 GPM6AP51674 278 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 MIDNQ504T8 468 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 C9orf135Q5VTT2 229 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 MEX3BQ6ZN04 569 aaKnown RBP14.86□□□□□ -0.03
FAM3A-222ENST00000621967 BOD1Q96IK1 185 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 HS3ST6Q96QI5 342 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 MTCH1Q9NZJ7 389 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 CACFD1Q9UGQ2 172 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 MLXQ9UH92 298 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 STRAPQ9Y3F4 350 aaKnown RBP14.86□□□□□ -0.03
FAM3A-222ENST00000621967 FAM215AQ9Y5M1 114 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 KPTNQ9Y664 436 aa14.86□□□□□ -0.03
FAM3A-222ENST00000621967 TRGV8A0A0C4DH27 118 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 TSPAN15O95858 294 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 TK1P04183 234 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 CCL2P13500 99 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 CCNOP22674 350 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 NHLH2Q02577 135 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 HERPUD1Q15011 391 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 HMGN3Q15651 99 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 TBC1D26Q86UD7 250 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 ZNF843Q8N446 348 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 ABHD14BQ96IU4 210 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 POM121L2Q96KW2 1035 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 OPA3Q9H6K4 179 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
FAM3A-222ENST00000621967 NKX2-6A6NCS4 301 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 ZNF732B4DXR9 585 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 PAX6P26367 422 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 EWSR1Q01844 656 aaKnown RBP eCLIP14.84□□□□□ -0.03
FAM3A-222ENST00000621967 GNMTQ14749 295 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 MKXQ8IYA7 352 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 SELENOHQ8IZQ5 122 aaKnown RBP14.84□□□□□ -0.03
FAM3A-222ENST00000621967 C9orf106Q8NAJ2 232 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 OR5A2Q8NGI9 324 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 GTF3AQ92664 365 aaKnown RBP14.84□□□□□ -0.03
FAM3A-222ENST00000621967 FAM208BQ5VWN6 2430 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 KIR2DS1A0A191URI9 304 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 DUXBA0A1W2PPF3 345 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 CLEC18AA5D8T8 446 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 SCTP09683 121 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 ARR3P36575 388 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 KIR2DS4P43632 304 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 MRPL49Q13405 166 aaKnown RBP14.84□□□□□ -0.03
FAM3A-222ENST00000621967 KIR2DS1Q14954 304 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 ZNF818PQ6ZRF7 136 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 LINC00518Q8N0U6 118 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 GCNT2Q8N0V5 402 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 CLEC18CQ8NCF0 446 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 SECTM1Q8WVN6 248 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 APH1AQ96BI3 265 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 GMPPAQ96IJ6 420 aaPredicted RBP14.84□□□□□ -0.03
FAM3A-222ENST00000621967 SPIN2AQ99865 258 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 SPIN2BQ9BPZ2 258 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 PARP12Q9H0J9 701 aaKnown RBP14.84□□□□□ -0.03
FAM3A-222ENST00000621967 GLRX2Q9NS18 164 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 C19orf12Q9NSK7 152 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 IL36RNQ9UBH0 155 aa14.84□□□□□ -0.03
FAM3A-222ENST00000621967 MED12LQ86YW9 2145 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms