RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 RGP1Q92546 391 aaPredicted RBP2.57□□□□□ -2
BRCA1-229ENST00000621897 OR52E6Q96RD3 313 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 HIST1H4GQ99525 98 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 EMC6Q9BV81 110 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 SUCNR1Q9BXA5 334 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 MS4A8Q9BY19 250 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 ABCG5Q9H222 651 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 FAM96AQ9H5X1 160 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 OR12D3Q9UGF7 316 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 ASB4Q9Y574 426 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 UBIAD1Q9Y5Z9 338 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 MYO15BQ96JP2 1530 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 KDM5BQ9UGL1 1544 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 BICRAQ9NZM4 1560 aa2.57□□□□□ -2
BRCA1-229ENST00000621897 SPEF2Q9C093 1822 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 IGKV1D-13A0A0B4J2D9 117 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 A0A0G2JRQ6 117 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 A0A1B0GV90 55 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 BTNL10A8MVZ5 291 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 C12orf77C9JDV5 145 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 D6RAR5 112 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 ATP6V1G2-DDX39BF2Z307 99 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 I3L4J1 428 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 SLC17A3O00476 420 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 PDE6DO43924 150 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 NPIPB7O75200 414 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 REM1O75628 298 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 C6orf47O95873 294 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 IGKV5-2P06315 115 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 OR8U8P0C7N1 319 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 GKN3PP0CG01 181 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 IGKV1-13P0DP09 117 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 ESDP10768 282 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 GPX2P18283 190 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 CD34P28906 385 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 NUDT1P36639 197 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 AKR1C3P42330 323 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 HSPE1P61604 102 aaKnown RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 HBG1P69891 147 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 HBG2P69892 147 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 SLC35A2P78381 396 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 PRDX1Q06830 199 aaKnown RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 SURF2Q15527 256 aaPredicted RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 TMEM128Q5BJH2 165 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 TTC32Q5I0X7 151 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 CLEC12AQ5QGZ9 265 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 FAM162BQ5T6X4 162 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 STEAP4Q687X5 459 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 TBPL2Q6SJ96 375 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 C4orf22Q6V702 233 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 SLC16A13Q7RTY0 426 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 ZNF571Q7Z3V5 609 aaPredicted RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 LRRC28Q86X40 367 aaPredicted RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 SLC35G3Q8N808 338 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 UBAC2Q8NBM4 344 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 OR9A2Q8NGT5 310 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 OR2A12Q8NGT7 310 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 ZNRF2Q8NHG8 242 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 MFSD8Q8NHS3 518 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 C7orf33Q8WU49 177 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 ABHD3Q8WU67 409 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 CHCHD10Q8WYQ3 142 aaPredicted RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 BORCS7Q96B45 105 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 AURKBQ96GD4 344 aaPredicted RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 DCUN1D1Q96GG9 259 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 SMARCD1Q96GM5 515 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 OR2M4Q96R27 311 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 RNF126Q9BV68 326 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 SCRT1Q9BWW7 348 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 MROQ9BYG7 248 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 CCDC90BQ9GZT6 254 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 ZDHHC11Q9H8X9 412 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 RRAGDQ9NQL2 400 aaPredicted RBP2.56□□□□□ -2
BRCA1-229ENST00000621897 RGS18Q9NS28 235 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 RASL12Q9NYN1 266 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 XCL2Q9UBD3 114 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 JPT1Q9UK76 154 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 PYCARDQ9ULZ3 195 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 CLUHO75153 1309 aa2.56□□□□□ -2
BRCA1-229ENST00000621897 IGLV1-36A0A0B4J1U3 117 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 SPRR5A0A1B0GTR4 108 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 RBMY1BA6NDE4 496 aaKnown RBP2.55□□□□□ -2
BRCA1-229ENST00000621897 RBMY1EA6NEQ0 496 aaKnown RBP2.55□□□□□ -2
BRCA1-229ENST00000621897 FAAHO00519 579 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 PFDN1O60925 122 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 IGHG2P01859 326 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 TTRP02766 147 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 FBP1P09467 338 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 RBMY1DP0C7P1 496 aaKnown RBP2.55□□□□□ -2
BRCA1-229ENST00000621897 RBMY1A1P0DJD3 496 aaKnown RBP2.55□□□□□ -2
BRCA1-229ENST00000621897 OR5H8P0DN80 308 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 GABRA1P14867 456 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 IGLL1P15814 213 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 ZNF708P17019 499 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 RCVRNP35243 200 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 MYH10P35580 1976 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 CTRLP40313 264 aa2.55□□□□□ -2
BRCA1-229ENST00000621897 RPS10P46783 165 aaKnown RBP2.55□□□□□ -2
BRCA1-229ENST00000621897 YLPM1P49750 1951 aaKnown RBP2.55□□□□□ -2
BRCA1-229ENST00000621897 H2BFSP57053 126 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms