RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 BIN3Q9NQY0 253 aa8□□□□□ -1.13
GGA3-223ENST00000621870 PRR13Q9NZ81 148 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ZNF629Q9UEG4 869 aaPredicted RBP8□□□□□ -1.13
GGA3-223ENST00000621870 NAV2Q8IVL1 2488 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ZSWIM8A7E2V4 1837 aa8□□□□□ -1.13
GGA3-223ENST00000621870 LOC102723996A0A087X1L8 192 aa8□□□□□ -1.13
GGA3-223ENST00000621870 OR2B8PP59922 312 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ROM1Q03395 351 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ASCL5Q7RTU5 278 aa8□□□□□ -1.13
GGA3-223ENST00000621870 GAPTQ8N292 157 aa8□□□□□ -1.13
GGA3-223ENST00000621870 MUC20Q8N307 709 aaPredicted RBP8□□□□□ -1.13
GGA3-223ENST00000621870 C15orf54Q8N8G6 183 aa8□□□□□ -1.13
GGA3-223ENST00000621870 OR8G5Q8NG78 346 aa8□□□□□ -1.13
GGA3-223ENST00000621870 OR13D1Q8NGV5 346 aa8□□□□□ -1.13
GGA3-223ENST00000621870 MITD1Q8WV92 249 aa8□□□□□ -1.13
GGA3-223ENST00000621870 WDFY2Q96P53 400 aa8□□□□□ -1.13
GGA3-223ENST00000621870 SOX7Q9BT81 388 aa8□□□□□ -1.13
GGA3-223ENST00000621870 RNF122Q9H9V4 155 aa8□□□□□ -1.13
GGA3-223ENST00000621870 C19orf12Q9NSK7 152 aa8□□□□□ -1.13
GGA3-223ENST00000621870 IL19Q9UHD0 177 aa8□□□□□ -1.13
GGA3-223ENST00000621870 ST6GALNAC2Q9UJ37 374 aa8□□□□□ -1.13
GGA3-223ENST00000621870 THSD7BQ9C0I4 1608 aa8□□□□□ -1.13
GGA3-223ENST00000621870 FASNP49327 2511 aaKnown RBP8□□□□□ -1.13
GGA3-223ENST00000621870 VWA8A3KMH1 1905 aa8□□□□□ -1.13
GGA3-223ENST00000621870 A0A1W2PNV4 684 aa8□□□□□ -1.13
GGA3-223ENST00000621870 TAAR5O14804 337 aa8□□□□□ -1.13
GGA3-223ENST00000621870 MPV17P39210 176 aa8□□□□□ -1.13
GGA3-223ENST00000621870 LGALS7P47929 136 aa8□□□□□ -1.13
GGA3-223ENST00000621870 UBE2G2P60604 165 aa8□□□□□ -1.13
GGA3-223ENST00000621870 EXOSC2Q13868 293 aaKnown RBP8□□□□□ -1.13
GGA3-223ENST00000621870 DEPPQ9NTK1 212 aa8□□□□□ -1.13
GGA3-223ENST00000621870 UQCC1Q9NVA1 299 aa8□□□□□ -1.13
GGA3-223ENST00000621870 SF3B6Q9Y3B4 125 aaKnown RBP8□□□□□ -1.13
GGA3-223ENST00000621870 URGCP-MRPS24S4R325 110 aa8□□□□□ -1.13
GGA3-223ENST00000621870 NOTCH4Q99466 2003 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 ZNF462Q96JM2 2506 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SRSF6Q13247 344 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 SCGB2A2Q13296 93 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 TIGITQ495A1 244 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 ACSF3Q4G176 576 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 TIMM23BQ5SRD1 257 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 PXDC1Q5TGL8 231 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 GGNBP1Q5YKI7 109 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 PRR27Q6MZM9 219 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SVBPQ8N300 66 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SLC25A32Q9H2D1 315 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SLC25A22Q9H936 323 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 CA10Q9NS85 328 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 COA4Q9NYJ1 87 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 DOK5Q9P104 306 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 PHF3Q92576 2039 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 PDCD11Q14690 1871 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 CYB5R3P00387 301 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 FGF2P09038 288 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 CEBPDP49716 269 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 POLR2GP62487 172 aaKnown RBP eCLIP7.99□□□□□ -1.13
GGA3-223ENST00000621870 TMEM267Q0VDI3 215 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 RAB32Q13637 225 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 KCNIP4Q6PIL6 250 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 GLDNQ6ZMI3 551 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 C17orf82Q86X59 251 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 C9orf106Q8NAJ2 232 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 OR4F5Q8NH21 305 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 FAM57AQ8TBR7 257 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 FLYWCH2Q96CP2 140 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 R3HDM4Q96D70 268 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 OR4F4Q96R69 305 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 DIRC2Q96SL1 478 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SAMD10Q9BYL1 202 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SIRT7Q9NRC8 400 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 HIVEP3Q5T1R4 2406 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 PATJQ8NI35 1801 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 CECR9P0C854 216 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 TRAPPC2P0DI81 140 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 TRAPPC2BP0DI82 140 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 RBM11P57052 281 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 HLA-DRB3P79483 266 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 HIST2H3AQ71DI3 136 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 TBC1D26Q86UD7 250 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 SHISA5Q8N114 240 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 RBPMSQ93062 196 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 ZNF837Q96EG3 531 aaPredicted RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 NDFIP1Q9BT67 221 aa7.99□□□□□ -1.13
GGA3-223ENST00000621870 MRPS18AQ9NVS2 196 aaKnown RBP7.99□□□□□ -1.13
GGA3-223ENST00000621870 JMJD1CQ15652 2540 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 SH2D7A6NKC9 451 aaPredicted RBP7.98□□□□□ -1.13
GGA3-223ENST00000621870 ZG16O60844 167 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ADAM11O75078 769 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 UNQ6494/PRO21346Q6UXR6 183 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 OR52L2PQ8NGH6 319 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 RALYQ9UKM9 306 aaKnown RBP7.98□□□□□ -1.13
GGA3-223ENST00000621870 FAM24AA6NFZ4 105 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 NEURL1O76050 574 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 SFT2D2O95562 160 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 THY1P04216 161 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 CD37P11049 281 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 GZMKP49863 264 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 ECSCRQ19T08 205 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 MARC2Q969Z3 335 aa7.98□□□□□ -1.13
GGA3-223ENST00000621870 MRGPRFQ96AM1 343 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms