RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CACNA1DQ01668 2161 aa17.99■□□□□ 0.47
SPAST-204ENST00000621856 A0A0B4J2A0 478 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 CRYM-AS1A6NIL9 109 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 IFNA2P01563 188 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 TFF3Q07654 80 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 KRBOX4Q5JUW0 171 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 FAM201AQ5SY85 155 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 ZBTB8BQ8NAP8 495 aaPredicted RBP17.98■□□□□ 0.47
SPAST-204ENST00000621856 OR11H4Q8NGC9 324 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 PPP1R35Q8TAP8 253 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 COQ2Q96H96 371 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 RSRP1Q9BUV0 290 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 SEBOXQ9HB31 216 aaPredicted RBP17.98■□□□□ 0.47
SPAST-204ENST00000621856 TAF9BQ9HBM6 251 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 PLSCR3Q9NRY6 295 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 PRR13Q9NZ81 148 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 SHPKQ9UHJ6 478 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 DYSFO75923 2080 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 TRBV6-7A0A0A0MS04 114 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 FAM25EA8MYX2 175 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 G3V3Q6 166 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 TUSC2O75896 110 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 HMGN3Q15651 99 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 Q5BKY6 102 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 FAM209AQ5JX71 171 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 CCDC71LQ8N9Z2 235 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 GRPEL2Q8TAA5 225 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 SECTM1Q8WVN6 248 aa17.98■□□□□ 0.47
SPAST-204ENST00000621856 CISD1Q9NZ45 108 aaKnown RBP17.98■□□□□ 0.47
SPAST-204ENST00000621856 NBEAQ8NFP9 2946 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 SIAH2O43255 324 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 HLA-GP17693 338 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 HCFC1P51610 2035 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 ANKRD55Q3KP44 614 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 UBALD1Q8TB05 177 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 SNX22Q96L94 193 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 SLC5A7Q9GZV3 580 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 SAP30LQ9HAJ7 183 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 SLC2A9Q9NRM0 540 aa17.97■□□□□ 0.47
SPAST-204ENST00000621856 LRRC30A6NM36 301 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 B9A039 149 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 HSPA12AO43301 675 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 EDDM3AQ14507 147 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 EFNB3Q15768 340 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 FAM222BQ8WU58 562 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 RTN4IP1Q8WWV3 396 aaPredicted RBP17.96■□□□□ 0.47
SPAST-204ENST00000621856 SHARPINQ9H0F6 387 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 MS4A5Q9H3V2 200 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 NAA60Q9H7X0 242 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 OR1A1Q9P1Q5 309 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 KCNIP3Q9Y2W7 256 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 HSPB11Q9Y547 144 aa17.96■□□□□ 0.47
SPAST-204ENST00000621856 C5orf51A6NDU8 294 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 OOEPA6NGQ2 149 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 DBX1A6NMT0 343 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 ZG16O60844 167 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 ZNF737O75373 536 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 CLDN14O95500 239 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 GLIPR1P48060 266 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 H1FOOQ8IZA3 346 aaPredicted RBP17.95■□□□□ 0.46
SPAST-204ENST00000621856 C9orf62Q8N4C0 152 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 ZNF808Q8N4W9 903 aaPredicted RBP17.95■□□□□ 0.46
SPAST-204ENST00000621856 ANGPTL6Q8NI99 470 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 DNTTIP1Q9H147 329 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 ACACBO00763 2458 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 IGKV1D-13A0A0B4J2D9 117 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 NPIPB11E5RHQ5 1161 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 RGS11O94810 467 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 IGKV1-13P0DP09 117 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 C6orf183Q5T699 404 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 LAMTOR1Q6IAA8 161 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 TGIF2LYQ8IUE0 185 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 TPRX1Q8N7U7 411 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 DEFB108BQ8NET1 73 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 MRGPRDQ8TDS7 321 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 SEC22AQ96IW7 307 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 OR2W1Q9Y3N9 320 aa17.95■□□□□ 0.46
SPAST-204ENST00000621856 C13orf42A0A1B0GVH6 325 aa17.94■□□□□ 0.46
SPAST-204ENST00000621856 DEFB108AA8MXU0 73 aa17.94■□□□□ 0.46
SPAST-204ENST00000621856 MGST3O14880 152 aa17.94■□□□□ 0.46
SPAST-204ENST00000621856 SNRPD2P62316 118 aaKnown RBP17.94■□□□□ 0.46
SPAST-204ENST00000621856 ZNF672Q499Z4 452 aaPredicted RBP17.94■□□□□ 0.46
SPAST-204ENST00000621856 GSG1LQ6UXU4 331 aa17.94■□□□□ 0.46
SPAST-204ENST00000621856 FAM185AQ8N0U4 392 aa17.94■□□□□ 0.46
SPAST-204ENST00000621856 RAB18Q9NP72 206 aa17.94■□□□□ 0.46
SPAST-204ENST00000621856 RAI1Q7Z5J4 1906 aaPredicted RBP17.93■□□□□ 0.46
SPAST-204ENST00000621856 ROS1P08922 2347 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 C12orf77C9JDV5 145 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 GPR31O00270 319 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 HSD17B6O14756 317 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 GNRHRP30968 328 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 IL2RGP31785 369 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 SRSF4Q08170 494 aaKnown RBP17.93■□□□□ 0.46
SPAST-204ENST00000621856 MST1LQ2TV78 715 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 STUMQ69YW2 141 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 ZNRF1Q8ND25 227 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 OR1L1Q8NH94 360 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 LILRB1Q8NHL6 650 aaPredicted RBP17.93■□□□□ 0.46
SPAST-204ENST00000621856 ITLN2Q8WWU7 325 aaPredicted RBP17.93■□□□□ 0.46
SPAST-204ENST00000621856 TMEM246Q9BRR3 403 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms