RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 PHB2Q99623 299 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 ZNF471Q9BX82 626 aaPredicted RBP8.87□□□□□ -0.99
VPS11-208ENST00000621676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.87□□□□□ -0.99
VPS11-208ENST00000621676 PSG11Q9UQ72 335 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 SPEF1Q9Y4P9 236 aa8.87□□□□□ -0.99
VPS11-208ENST00000621676 KIAA1324LA8MWY0 1029 aaPredicted RBP8.86□□□□□ -0.99
VPS11-208ENST00000621676 SH2D1BO14796 132 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 TMEM268Q5VZI3 342 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 ZNF818PQ6ZRF7 136 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 DCUN1D4Q92564 292 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 SFXN3Q9BWM7 321 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 MFFQ9GZY8 342 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 SAP30LQ9HAJ7 183 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 NECAP2Q9NVZ3 263 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 IGHV3-72A0A0B4J1Y9 119 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 NAP1L6A6NFF2 107 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 AGPAT2O15120 278 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 PPYP01298 95 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 PSG2P11465 335 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 S100A1P23297 94 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 PRDX2P32119 198 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 RAB32Q13637 225 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 LAMTOR1Q6IAA8 161 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 FAM89BQ8N5H3 189 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 GCSAMQ8N6F7 178 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 CD177Q8N6Q3 437 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 TP53RKQ96S44 253 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 SCPEP1Q9HB40 452 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 NPDC1Q9NQX5 325 aaPredicted RBP8.86□□□□□ -0.99
VPS11-208ENST00000621676 SLC2A9Q9NRM0 540 aa8.86□□□□□ -0.99
VPS11-208ENST00000621676 CCL3L1P16619 93 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 CXCL2P19875 107 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 CEACAM8P31997 349 aaPredicted RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 GUSBP1Q15486 140 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 ZNF324BQ6AW86 544 aaPredicted RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 THOC7Q6I9Y2 204 aaKnown RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 PEG10Q86TG7 708 aaKnown RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 SGPP2Q8IWX5 399 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 C11orf53Q8IXP5 236 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 UBTD1Q9HAC8 227 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 KCNJ16Q9NPI9 418 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 PIPOXQ9P0Z9 390 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 NBPF19A0A087WUL8 3843 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 A0A1B0GUH1 482 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 SOX15O60248 233 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 IGHV1-46P01743 117 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 SUPT4H1P63272 117 aaKnown RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 ADIPOQQ15848 244 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 LYPD2Q6UXB3 125 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 CPNE2Q96FN4 548 aaPredicted RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 CLEC4MQ9H2X3 399 aaPredicted RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 GCN1Q92616 2671 aaKnown RBP8.85□□□□□ -0.99
VPS11-208ENST00000621676 CST4P01036 141 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 CAV2P51636 162 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 BTG1P62324 171 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 ADORA2A-AS1P86434 159 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 CLINT1Q14677 625 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 FAM90A1Q86YD7 464 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 FAM117AQ9C073 453 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 MAB21L2Q9Y586 359 aa8.85□□□□□ -0.99
VPS11-208ENST00000621676 C7orf66A4D0T2 115 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 E7EQL1 145 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 C19orf84I3L1E1 186 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 M0R233 179 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 SULT1A3P0DMM9 295 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 SULT1A4P0DMN0 295 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 CD24P25063 80 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 TAS2R46P59540 309 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 LYG2Q86SG7 212 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 CDH26Q8IXH8 852 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 OR52M1Q8NGK5 317 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 C17orf50Q8WW18 174 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 BBC3Q96PG8 261 aaPredicted RBP8.84□□□□□ -0.99
VPS11-208ENST00000621676 TECTBQ96PL2 329 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 SLC25A21Q9BQT8 299 aaPredicted RBP8.84□□□□□ -0.99
VPS11-208ENST00000621676 OCSTAMPQ9BR26 566 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 OR2D2Q9H210 308 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 CXXC4Q9H2H0 198 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 OR5AC2Q9NZP5 309 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 NDRG3Q9UGV2 375 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 POLDIP2Q9Y2S7 368 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 MSGN1A6NI15 193 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 OR5B21A6NL26 309 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 F5H0A9 414 aaPredicted RBP8.84□□□□□ -0.99
VPS11-208ENST00000621676 MMP23AO75900 390 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 IRF2P14316 349 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 LDLRAD3Q86YD5 345 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 NINJ1Q92982 152 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 MEGF10Q96KG7 1140 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 RANBP3Q9H6Z4 567 aaPredicted RBP8.84□□□□□ -0.99
VPS11-208ENST00000621676 OPN4Q9UHM6 478 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 GPR132Q9UNW8 380 aa8.84□□□□□ -0.99
VPS11-208ENST00000621676 ADAM20O43506 726 aa8.83□□□□□ -1
VPS11-208ENST00000621676 CST7O76096 145 aa8.83□□□□□ -1
VPS11-208ENST00000621676 HEXAP06865 529 aa8.83□□□□□ -1
VPS11-208ENST00000621676 RNF224P0DH78 156 aa8.83□□□□□ -1
VPS11-208ENST00000621676 IAPPP10997 89 aa8.83□□□□□ -1
VPS11-208ENST00000621676 LY6G6FQ5SQ64 297 aa8.83□□□□□ -1
VPS11-208ENST00000621676 CD276Q5ZPR3 534 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms