RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 PUSL1Q8N0Z8 303 aaKnown RBP18.07■□□□□ 0.48
LIME1-210ENST00000621325 GALNT14Q96FL9 552 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 BOD1Q96IK1 185 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 RSRP1Q9BUV0 290 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 KCNIP3Q9Y2W7 256 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 FAM215AQ9Y5M1 114 aa18.07■□□□□ 0.48
LIME1-210ENST00000621325 ZNF729A6NN14 1252 aaPredicted RBP18.06■□□□□ 0.48
LIME1-210ENST00000621325 GRPP07492 148 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 RCC1P18754 421 aaPredicted RBP18.06■□□□□ 0.48
LIME1-210ENST00000621325 HOXA4Q00056 320 aaPredicted RBP18.06■□□□□ 0.48
LIME1-210ENST00000621325 IL13RA2Q14627 380 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 Q6P435 159 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 LINC00596Q86U02 117 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 SPACA1Q9HBV2 294 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 TRDCB7Z8K6 153 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 GPHA2Q96T91 129 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 SPOCK3Q9BQ16 436 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 RASL12Q9NYN1 266 aa18.06■□□□□ 0.48
LIME1-210ENST00000621325 ATMQ13315 3056 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 TRAV39A0A0B4J263 110 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 DEGS1O15121 323 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 SLC34A2O95436 690 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 LYL1P12980 280 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 GNRHRP30968 328 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 ERVK11-1P61568 191 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 OR8G1Q15617 311 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 SRSF7Q16629 238 aaKnown RBP eCLIP18.05■□□□□ 0.48
LIME1-210ENST00000621325 LYZL2Q7Z4W2 148 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 PFDN5Q99471 154 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 ATP23Q9Y6H3 246 aa18.05■□□□□ 0.48
LIME1-210ENST00000621325 IGKV1D-13A0A0B4J2D9 117 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 MLNRO43193 412 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 TK1P04183 234 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 IGKV1-13P0DP09 117 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 SECTM1Q8WVN6 248 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 OBP2BQ9NPH6 170 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 UFSP2Q9NUQ7 469 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 ACACAQ13085 2346 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 IGHV1-18A0A0C4DH31 117 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 SIRPB1O00241 398 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 AVPI1Q5T686 147 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 CYB5R2Q6BCY4 276 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 BHLHA15Q7RTS1 189 aaPredicted RBP18.04■□□□□ 0.48
LIME1-210ENST00000621325 MSI2Q96DH6 328 aaKnown RBP18.04■□□□□ 0.48
LIME1-210ENST00000621325 TP53RKQ96S44 253 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 NRIP2Q9BQI9 281 aa18.04■□□□□ 0.48
LIME1-210ENST00000621325 PHF1O43189 567 aaPredicted RBP18.03■□□□□ 0.48
LIME1-210ENST00000621325 IGLV1-44P01699 117 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 FABP6P51161 128 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 GUCA2BQ16661 112 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 RXFP4Q8TDU9 374 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 SEBOXQ9HB31 216 aaPredicted RBP18.03■□□□□ 0.48
LIME1-210ENST00000621325 CUL9Q8IWT3 2517 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 KIR2DS1A0A191URI9 304 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 OR2H2O95918 312 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 IFNA21P01568 189 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 PGA5P0DJD9 388 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 MUC1P15941 1255 aaPredicted RBP18.03■□□□□ 0.48
LIME1-210ENST00000621325 NDUFB7P17568 137 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 KIR2DS4P43632 304 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 CASP6P55212 293 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 KIR2DS1Q14954 304 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 ANKRD39Q53RE8 183 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 LIAT1Q6ZQX7 453 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 ZNF826PQ6ZT77 177 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 TSNAXQ99598 290 aaKnown RBP18.03■□□□□ 0.48
LIME1-210ENST00000621325 POLDIP2Q9Y2S7 368 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 MEMO1Q9Y316 297 aa18.03■□□□□ 0.48
LIME1-210ENST00000621325 MEX3AA1L020 520 aaKnown RBP18.02■□□□□ 0.48
LIME1-210ENST00000621325 OR5H1A6NKK0 313 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 TXNL1O43396 289 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 DIRAS3O95661 229 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 P2RY6Q15077 328 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 ZNF818PQ6ZRF7 136 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 SYT3Q9BQG1 590 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 CYTL1Q9NRR1 136 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 TMEM100Q9NV29 134 aa18.02■□□□□ 0.48
LIME1-210ENST00000621325 HEATR1Q9H583 2144 aaKnown RBP18.02■□□□□ 0.48
LIME1-210ENST00000621325 IGHV2OR16-5A0A0B4J2B6 119 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 MPPED1O15442 326 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 NXPH2O95156 264 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 SPIN3Q5JUX0 258 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 ZNF474Q6S9Z5 364 aaPredicted RBP18.02■□□□□ 0.47
LIME1-210ENST00000621325 PCSK4Q6UW60 755 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 BOLLQ8N9W6 283 aaKnown RBP18.02■□□□□ 0.47
LIME1-210ENST00000621325 OR8G5Q8NG78 346 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 PLPPR1Q8TBJ4 325 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 C18orf12Q96KH6 178 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 CNTNAP3BQ96NU0 1288 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 SUCNR1Q9BXA5 334 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 COL25A1Q9BXS0 654 aaPredicted RBP18.02■□□□□ 0.47
LIME1-210ENST00000621325 CNTNAP3Q9BZ76 1288 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 TAS2R3Q9NYW6 316 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 BSNQ9UPA5 3926 aa18.02■□□□□ 0.47
LIME1-210ENST00000621325 TUSC2O75896 110 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 EIF2S3P41091 472 aaKnown RBP18.01■□□□□ 0.47
LIME1-210ENST00000621325 Q6ZR03 302 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 GAPTQ8N292 157 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 RIMS4Q9H426 269 aaPredicted RBP18.01■□□□□ 0.47
LIME1-210ENST00000621325 MSL2Q9HCI7 577 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms