RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MPV17LQ2QL34 196 aa16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 SPSB4Q96A44 273 aa16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 ZNF665Q9H7R5 613 aa16.77■□□□□ 0.27
PDLIM3-212ENST00000620787 IGHV1-45A0A0A0MS14 117 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 CLDN34H7C241 214 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 TNFSF12O43508 249 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 DNPH1O43598 174 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 CLDN15P56746 228 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 B3GALT5-AS1P59052 145 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 TMEM267Q0VDI3 215 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 DNASE2BQ8WZ79 361 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 FGF23Q9GZV9 251 aaPredicted RBP16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 RPRMQ9NS64 109 aa16.76■□□□□ 0.27
PDLIM3-212ENST00000620787 ZFP92A6NM28 416 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 PGLYRP1O75594 196 aaPredicted RBP16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 IFNA5P01569 189 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 CYC1P08574 325 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 CD81P60033 236 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 ZNF726P1Q15940 193 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 AAED1Q7RTV5 226 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 IMMP1LQ96LU5 166 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 RSG1Q9BU20 258 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 VSIRQ9H7M9 311 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 IL36RNQ9UBH0 155 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 CHD3Q12873 2000 aaKnown RBP16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 GJE1A6NN92 205 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 KIAA1324LA8MWY0 1029 aaPredicted RBP16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 TGOLN2O43493 480 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 HLA-HP01893 362 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 SSR4P51571 173 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 C4orf17Q53FE4 359 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 ZNF787Q6DD87 383 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 OR2V1Q8NHB1 315 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 CA5BP1Q8WTZ4 195 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 GPR146Q96CH1 333 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 SSX3Q99909 188 aa16.75■□□□□ 0.27
PDLIM3-212ENST00000620787 SSX7Q7RTT5 188 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 C1QTNF5Q9BXJ0 243 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 SDF2L1Q9HCN8 221 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 OCIAD1Q9NX40 245 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 LY6G6EA0A0G2JKS1 128 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 CBR3O75828 277 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 PGA5P0DJD9 388 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 COX6A1P12074 109 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 FGF12P61328 243 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 PCBD1P61457 104 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 PKIAP61925 76 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 SLC25A24Q6NUK1 477 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 GGNQ86UU5 652 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 WDR54Q9H977 334 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 CRIM1Q9NZV1 1036 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 U3KQA8 63 aa16.74■□□□□ 0.27
PDLIM3-212ENST00000620787 TRBV24-1A0A075B6N3 115 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 KIR2DS1A0A191URI9 304 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 HSPB6O14558 160 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 GDF9O60383 454 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 UMODP07911 640 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 MMP7P09237 267 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 F2RP25116 425 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 KIR2DS4P43632 304 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 KIR2DS1Q14954 304 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 UNQ6494/PRO21346Q6UXR6 183 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 REC114Q7Z4M0 266 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 MBD3L1Q8WWY6 194 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 GTF3AQ92664 365 aaKnown RBP16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 PACRGQ96M98 296 aaPredicted RBP16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 HIST1H2BLQ99880 126 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 GPR35Q9HC97 309 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 UFSP2Q9NUQ7 469 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 ATP23Q9Y6H3 246 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 JMJD7P0C870 316 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 DDTP30046 118 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 CARD18P57730 90 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 LCN15Q6UWW0 184 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 CDH20Q9HBT6 801 aa16.73■□□□□ 0.27
PDLIM3-212ENST00000620787 FGF8P55075 233 aaPredicted RBP16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 SSTP61278 116 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 PCSK4Q6UW60 755 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 YRDCQ86U90 279 aaKnown RBP16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 CPEB3Q8NE35 698 aaKnown RBP16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 OR56B2PQ8NGI1 322 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 SNX22Q96L94 193 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 RAB40CQ96S21 281 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 PRDM14Q9GZV8 571 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 CTXN2P0C2S0 81 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 SLC25A6P12236 298 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 IZUMO4Q1ZYL8 232 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 PRO1933Q9H354 126 aa16.72■□□□□ 0.27
PDLIM3-212ENST00000620787 CACNA1EQ15878 2313 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 A0A0G2JMM0 328 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 A0A1B0GV90 55 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 A0A1W2PPB8 328 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 A0A1W2PRS3 328 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 KIR3DP1A8MWS1 328 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 CXCL13O43927 109 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 PRDX4Q13162 271 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 RIPPLY2Q5TAB7 128 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 ABLIM2Q6H8Q1 611 aa16.71■□□□□ 0.27
PDLIM3-212ENST00000620787 DBX2Q6ZNG2 339 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms