RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 TRAPPC6BQ86SZ2 158 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 LINC00596Q86U02 117 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 FAM90A1Q86YD7 464 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 LHX4Q969G2 390 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 NEDD4LQ96PU5 975 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 TLNRD1Q9H1K6 362 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 PLEKHJ1Q9NW61 149 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 ELF5Q9UKW6 265 aaPredicted RBP13.28□□□□□ -0.28
CD40-207ENST00000620709 HSF4Q9ULV5 492 aa13.28□□□□□ -0.28
CD40-207ENST00000620709 FAM240BA0A1B0GVZ2 78 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 CLDN34H7C241 214 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 CDIPTO14735 213 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 RHBDL1O75783 438 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 CRYBA1P05813 215 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 LIPFP07098 398 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 SPNP16150 400 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 MDKP21741 143 aaPredicted RBP13.27□□□□□ -0.29
CD40-207ENST00000620709 RCVRNP35243 200 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 FAUP35544 74 aaKnown RBP13.27□□□□□ -0.29
CD40-207ENST00000620709 ARF6P62330 175 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 MPV17LQ2QL34 196 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.29
CD40-207ENST00000620709 PDZD9Q8IXQ8 264 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 BATF2Q8N1L9 274 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 NUDCD2Q8WVJ2 157 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 TBX15Q96SF7 602 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 CCL13Q99616 98 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 ZNF107Q9UII5 783 aaPredicted RBP13.27□□□□□ -0.29
CD40-207ENST00000620709 KCNK7Q9Y2U2 307 aa13.27□□□□□ -0.29
CD40-207ENST00000620709 MGAM2Q2M2H8 2515 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 H3BUI4 141 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 CA11O75493 328 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 ACAA1P09110 424 aaPredicted RBP13.26□□□□□ -0.29
CD40-207ENST00000620709 PGA5P0DJD9 388 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 PRKACAP17612 351 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 CHATP28329 748 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 CBX5P45973 191 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 ARFRP1Q13795 201 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 IL13RA2Q14627 380 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 MICBQ29980 383 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 OLFML2AQ68BL7 652 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 SIGIRRQ6IA17 410 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 RTN4RL2Q86UN3 420 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 FAM58AQ8N1B3 248 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 FGFRL1Q8N441 504 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 EMG1Q92979 244 aaKnown RBP13.26□□□□□ -0.29
CD40-207ENST00000620709 IFT46Q9NQC8 304 aa13.26□□□□□ -0.29
CD40-207ENST00000620709 CENPVL3A0A0U1RRI6 287 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 A0A1B0GW55 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 FAM181BA6NEQ2 426 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 SRRM5B3KS81 715 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 F8VVB4 439 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 F8VWA3 439 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 TNFRSF13BO14836 293 aaPredicted RBP13.25□□□□□ -0.29
CD40-207ENST00000620709 PDCD6O75340 191 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 OR7C1O76099 320 aaPredicted RBP13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L2P0CJ85 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L3P0CJ86 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L4P0CJ87 422 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L5P0CJ88 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L6P0CJ89 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L7P0CJ90 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 TAS2R19P59542 299 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4L9Q6RFH8 374 aaPredicted RBP13.25□□□□□ -0.29
CD40-207ENST00000620709 FIP1L1Q6UN15 594 aaKnown RBP13.25□□□□□ -0.29
CD40-207ENST00000620709 C6orf201Q7Z4U5 140 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 TMEM229BQ8NBD8 167 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 POC1AQ8NBT0 407 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 ZNF488Q96MN9 340 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 NRIP2Q9BQI9 281 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 HRASLSQ9HDD0 168 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 ONECUT1Q9UBC0 465 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 DUX4Q9UBX2 424 aa13.25□□□□□ -0.29
CD40-207ENST00000620709 hCG_2014768A0A024R1R8 64 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 SSX5O60225 188 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 NOS1APO75052 506 aaPredicted RBP13.24□□□□□ -0.29
CD40-207ENST00000620709 LHBP01229 141 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 MT-ND4P03905 459 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 AKAIN1P0CW23 69 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 FUT3P21217 361 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 SLC6A1P30531 599 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 BTCP35070 178 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 SNU13P55769 128 aaKnown RBP13.24□□□□□ -0.29
CD40-207ENST00000620709 BPIFB3P59826 476 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 ERVK11-1P61568 191 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 IKZF1Q13422 519 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 PDCD1Q15116 288 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 TEX36Q5VZQ5 186 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 PLET1Q6UQ28 207 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 WDR82Q6UXN9 313 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 C11orf53Q8IXP5 236 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 DUSP18Q8NEJ0 188 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 OR5T2Q8NGG2 359 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 DPAGT1Q9H3H5 408 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 DNAJB11Q9UBS4 358 aa13.24□□□□□ -0.29
CD40-207ENST00000620709 POM121CA8CG34 1229 aa13.23□□□□□ -0.29
CD40-207ENST00000620709 FCN3O75636 299 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms