RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 TFAP2CQ92754 450 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 CYYR1Q96J86 154 aa13.68□□□□□ -0.22
HMGN3-203ENST00000620514 NKX1-2Q9UD57 310 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-203ENST00000620514 AMMECR1Q9Y4X0 333 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-203ENST00000620514 A0A1W2PPI3 338 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 A0A1W2PRX2 142 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A18PA6NE21 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A16PA6NEW6 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A20PA6NIJ5 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A9PA6NNJ1 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A12PA8MX19 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A5PA8MXJ8 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 C15orf65H3BRN8 121 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 SNRNP70P08621 437 aaKnown RBP13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A15PP0C7V4 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A13PP0C7W8 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A14PP0C7W9 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 FAM90A24PP0C7X0 464 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 EMX1Q04741 257 aaPredicted RBP13.67□□□□□ -0.22
HMGN3-203ENST00000620514 LYPD6Q86Y78 171 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 DRAM1Q8N682 238 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 OR10A7Q8NGE5 316 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 R3HDM4Q96D70 268 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 BANF2Q9H503 90 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 PCDHB16Q9NRJ7 776 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 PLXNB1O43157 2135 aa13.67□□□□□ -0.22
HMGN3-203ENST00000620514 MT-ND4P03905 459 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 CD1AP06126 327 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 FAM106CPP0CH98 169 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 GZMHP20718 246 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 CD83Q01151 205 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 MADCAM1Q13477 382 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 GPR176Q14439 515 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 INSL4Q14641 139 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 BEAN1Q3B7T3 259 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 TCTEX1D4Q5JR98 221 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 C9orf152Q5JTZ5 239 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 SAMD5Q5TGI4 173 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 AWAT2Q6E213 333 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 C10orf99Q6UWK7 81 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 ZNF497Q6ZNH5 498 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 CENPVQ7Z7K6 275 aaPredicted RBP13.66□□□□□ -0.22
HMGN3-203ENST00000620514 ARL11Q969Q4 196 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 RCC2Q9P258 522 aaKnown RBP13.66□□□□□ -0.22
HMGN3-203ENST00000620514 TGP01266 2768 aa13.66□□□□□ -0.22
HMGN3-203ENST00000620514 IGHV3-43A0A0B4J1X8 118 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 AIPO00170 330 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 IGHV3-43DP0DP04 118 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 VHLP40337 213 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 SLC16A12Q6ZSM3 486 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 THNSL2Q86YJ6 484 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 TMEM104Q8NE00 496 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 OR10X1Q8NGY0 326 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 SGCDQ92629 289 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 MOB4Q9Y3A3 225 aa13.65□□□□□ -0.22
HMGN3-203ENST00000620514 SDCBPO00560 298 aaPredicted RBP13.64□□□□□ -0.23
HMGN3-203ENST00000620514 PRB2P02812 416 aaPredicted RBP13.64□□□□□ -0.23
HMGN3-203ENST00000620514 CDK1P06493 297 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 REG1BP48304 166 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 RAB7AP51149 207 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 GP2P55259 537 aaKnown RBP13.64□□□□□ -0.23
HMGN3-203ENST00000620514 LOXL3P58215 753 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 HES1Q14469 280 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 HNF4GQ14541 408 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 FAM27D1Q5T7N8 215 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 OR4F17Q8NGA8 305 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 OR4F4Q96R69 305 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 SELENOIQ9C0D9 397 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 VCXQ9H320 206 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 GFOD1Q9NXC2 390 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 ETAA1Q9NY74 926 aa13.64□□□□□ -0.23
HMGN3-203ENST00000620514 C12orf77C9JDV5 145 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 MCRIP1C9JLW8 97 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 PTGES3LE9PB15 166 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 M0QZK8 103 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 HSD17B6O14756 317 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 ORC5O43913 435 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 CRTAPO75718 401 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-203ENST00000620514 IGKV1D-33P01593 117 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 IGKV1-33P01594 117 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 MGMTP16455 207 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 TMEM11P17152 192 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 OXLD1Q5BKU9 147 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 C6orf141Q5SZD1 244 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 KPRPQ5T749 579 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-203ENST00000620514 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
HMGN3-203ENST00000620514 RAB12Q6IQ22 244 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 OR8H3Q8N146 312 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 OR52M1Q8NGK5 317 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 OR4K15Q8NH41 348 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 NRG4Q8WWG1 115 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 MRPS24Q96EL2 167 aaKnown RBP13.63□□□□□ -0.23
HMGN3-203ENST00000620514 DCLRE1BQ9H816 532 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 SPACA1Q9HBV2 294 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 PEX16Q9Y5Y5 336 aa13.63□□□□□ -0.23
HMGN3-203ENST00000620514 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 IGHV3-72A0A0B4J1Y9 119 aa13.62□□□□□ -0.23
HMGN3-203ENST00000620514 TCRBV4S1A1TA0A5B7 111 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms