RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SHARPINQ9H0F6 387 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 MTCH1Q9NZJ7 389 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 IGHV3-43A0A0B4J1X8 118 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 CNIH1O95406 144 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 IGHV3-43DP0DP04 118 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 FAHD2BQ6P2I3 314 aaPredicted RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 FAHD2AQ96GK7 314 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 WDYHV1Q96HA8 205 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 TMED3Q9Y3Q3 217 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 MMP24Q9Y5R2 645 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 KIF26BQ2KJY2 2108 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 DVL1O14640 695 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 ONECUT2O95948 504 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 CTSDP07339 412 aaPredicted RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 MMP7P09237 267 aaPredicted RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 DVL1P1P54792 670 aaPredicted RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 RPS16P62249 146 aaKnown RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 RANP62826 216 aaKnown RBP12.01□□□□□ -0.49
CIITA-213ENST00000618327 ABLIM2Q6H8Q1 611 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 LINC00596Q86U02 117 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 ZNF485Q8NCK3 441 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 SCN8AQ9UQD0 1980 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 UTRNP46939 3433 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 CA11O75493 328 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 ZNF205O95201 554 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 KRASP01116 189 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 CTRB1P17538 263 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 PTGDSP41222 190 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 MOGAT2Q3SYC2 334 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 CTRB2Q6GPI1 263 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 DYRK2Q92630 601 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 ARL2-SNX15V9GYD0 113 aa12.01□□□□□ -0.49
CIITA-213ENST00000618327 C3orf85A0A1B0GTC6 90 aa12□□□□□ -0.49
CIITA-213ENST00000618327 TMPRSS2O15393 492 aa12□□□□□ -0.49
CIITA-213ENST00000618327 IAPPP10997 89 aa12□□□□□ -0.49
CIITA-213ENST00000618327 COX5AP20674 150 aa12□□□□□ -0.49
CIITA-213ENST00000618327 KRTDAPP60985 99 aa12□□□□□ -0.49
CIITA-213ENST00000618327 UBE2V2Q15819 145 aa12□□□□□ -0.49
CIITA-213ENST00000618327 HOGA1Q86XE5 327 aa12□□□□□ -0.49
CIITA-213ENST00000618327 COMMD1Q8N668 190 aa12□□□□□ -0.49
CIITA-213ENST00000618327 UBAC2Q8NBM4 344 aa12□□□□□ -0.49
CIITA-213ENST00000618327 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
CIITA-213ENST00000618327 KLK13Q9UKR3 277 aa12□□□□□ -0.49
CIITA-213ENST00000618327 DENND4CQ5VZ89 1909 aa12□□□□□ -0.49
CIITA-213ENST00000618327 RPL36A-HNRNPH2H7BZ11 118 aa12□□□□□ -0.49
CIITA-213ENST00000618327 CHEK1O14757 476 aa12□□□□□ -0.49
CIITA-213ENST00000618327 PJVKQ0ZLH3 352 aa12□□□□□ -0.49
CIITA-213ENST00000618327 IGFBP7Q16270 282 aa12□□□□□ -0.49
CIITA-213ENST00000618327 LYPD8Q6UX82 237 aa12□□□□□ -0.49
CIITA-213ENST00000618327 KCNK7Q9Y2U2 307 aa12□□□□□ -0.49
CIITA-213ENST00000618327 RTTNQ86VV8 2226 aa12□□□□□ -0.49
CIITA-213ENST00000618327 HSBP1O75506 76 aa12□□□□□ -0.49
CIITA-213ENST00000618327 ADRA2AP08913 450 aa12□□□□□ -0.49
CIITA-213ENST00000618327 SFTA3P0C7M3 94 aa12□□□□□ -0.49
CIITA-213ENST00000618327 FABP4P15090 132 aa12□□□□□ -0.49
CIITA-213ENST00000618327 TMEM11P17152 192 aa12□□□□□ -0.49
CIITA-213ENST00000618327 ARL16Q0P5N6 197 aa12□□□□□ -0.49
CIITA-213ENST00000618327 GUK1Q16774 197 aa12□□□□□ -0.49
CIITA-213ENST00000618327 NRN1LQ496H8 165 aa12□□□□□ -0.49
CIITA-213ENST00000618327 GINS3Q9BRX5 216 aa12□□□□□ -0.49
CIITA-213ENST00000618327 LOC390937A0A1W2PQ73 354 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 TOX4O94842 621 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 OR5AC1P0C628 307 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 FAM87AP0C7U9 286 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 FGF12P61328 243 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 MPPED2Q15777 294 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 PLA2G2CQ5R387 149 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 FAM162BQ5T6X4 162 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 LYG1Q8N1E2 194 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 SOX7Q9BT81 388 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 OR2D2Q9H210 308 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 GAL3ST2Q9H3Q3 398 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 CLCF1Q9UBD9 225 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 NBASA2RRP1 2371 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 RAB5AP20339 215 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 GNG10P50151 68 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 GAS1P54826 345 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 ZFHX2Q9C0A1 2572 aaPredicted RBP11.99□□□□□ -0.49
CIITA-213ENST00000618327 OOEPA6NGQ2 149 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 SYNGR3O43761 229 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 SULT1A3P0DMM9 295 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 SULT1A4P0DMN0 295 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 RAB13P51153 203 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 ZNF260Q3ZCT1 412 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 ZNF66Q6ZN08 573 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 ZCCHC14Q8WYQ9 949 aaKnown RBP11.99□□□□□ -0.49
CIITA-213ENST00000618327 RAB1CQ92928 201 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 CIB3Q96Q77 187 aaPredicted RBP11.99□□□□□ -0.49
CIITA-213ENST00000618327 PPYP01298 95 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 KLRB1Q12918 225 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 ACOT6Q3I5F7 207 aaPredicted RBP11.99□□□□□ -0.49
CIITA-213ENST00000618327 Q3ZCU0 254 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 SCMH1Q96GD3 660 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 PRO3102Q9H379 93 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 ZNF355PQ9NSJ1 428 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 FAM96BQ9Y3D0 163 aa11.99□□□□□ -0.49
CIITA-213ENST00000618327 OR5H1A6NKK0 313 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms