RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 HOXC12P31275 282 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 PIGPP57054 158 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 IL15RAQ13261 267 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 IL34Q6ZMJ4 242 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 PUSL1Q8N0Z8 303 aaKnown RBP14.82□□□□□ -0.04
CNOT3-209ENST00000617930 OR11L1Q8NGX0 322 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 MRPL30Q8TCC3 161 aaKnown RBP14.82□□□□□ -0.04
CNOT3-209ENST00000617930 SLC5A7Q9GZV3 580 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 A0A0G2JNJ9 132 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 ZNF728P0DKX0 622 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 SMCO1Q147U7 214 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 GUCA2BQ16661 112 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 SP6Q3SY56 376 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 BEND4Q6ZU67 534 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 SGPP2Q8IWX5 399 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 MOB3AQ96BX8 217 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 NRIP2Q9BQI9 281 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 LPAR3Q9UBY5 353 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 Q9UFV3 132 aa14.82□□□□□ -0.04
CNOT3-209ENST00000617930 TAAR5O14804 337 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 GRPP07492 148 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 FABP6P51161 128 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 IAH1Q2TAA2 248 aaPredicted RBP14.81□□□□□ -0.04
CNOT3-209ENST00000617930 EIF5AL1Q6IS14 154 aaKnown RBP14.81□□□□□ -0.04
CNOT3-209ENST00000617930 ZNF826PQ6ZT77 177 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 LDLRAD3Q86YD5 345 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 OR8G5Q8NG78 346 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 S100PBPQ96BU1 408 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 TMEM231Q9H6L2 316 aa14.81□□□□□ -0.04
CNOT3-209ENST00000617930 ACACBO00763 2458 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 FAM157CP0CG43 387 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 PGA5P0DJD9 388 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 RCC1P18754 421 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 SRSF3P84103 164 aaKnown RBP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 PJVKQ0ZLH3 352 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 RBM39Q14498 530 aaKnown RBP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 IL13RA2Q14627 380 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 SRSF7Q16629 238 aaKnown RBP eCLIP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 PHLDA2Q53GA4 152 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 PLK3Q9H4B4 646 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 MSL2Q9HCI7 577 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 POLEQ07864 2286 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 PRRG2O14669 202 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 KCNJ3P48549 501 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 FLI1Q01543 452 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 KLRB1Q12918 225 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 OR8G1Q15617 311 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 SPAG16Q8N0X2 631 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 KDF1Q8NAX2 398 aaPredicted RBP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 OR4A4PQ8NGN8 299 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 HRH4Q9H3N8 390 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 IFT22Q9H7X7 185 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 TAF9BQ9HBM6 251 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 SLC2A9Q9NRM0 540 aa14.8□□□□□ -0.04
CNOT3-209ENST00000617930 CARHSP1Q9Y2V2 147 aaKnown RBP14.8□□□□□ -0.04
CNOT3-209ENST00000617930 NBASA2RRP1 2371 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 TRAV39A0A0B4J263 110 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 KALRNO60229 2985 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 PPYP01298 95 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 IFNA21P01568 189 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 KITLGP21583 273 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 RPL7L1Q6DKI1 246 aaKnown RBP14.79□□□□□ -0.04
CNOT3-209ENST00000617930 ALKBH2Q6NS38 261 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 TMEM88Q6PEY1 159 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 LINC00596Q86U02 117 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 PLPPR1Q8TBJ4 325 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 NEK7Q8TDX7 302 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 RTN4IP1Q8WWV3 396 aaPredicted RBP14.79□□□□□ -0.04
CNOT3-209ENST00000617930 GTF3AQ92664 365 aaKnown RBP14.79□□□□□ -0.04
CNOT3-209ENST00000617930 RSRP1Q9BUV0 290 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 CNTNAP3Q9BZ76 1288 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 OBP2BQ9NPH6 170 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 NDRG3Q9UGV2 375 aa14.79□□□□□ -0.04
CNOT3-209ENST00000617930 IGKV1D-13A0A0B4J2D9 117 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 WNT9BO14905 357 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 MED6O75586 246 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 SNAPINO95295 136 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 OR2H2O95918 312 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 OR5AC1P0C628 307 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 IGKV1-13P0DP09 117 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 HKR1P10072 659 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 GNRHRP30968 328 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 CEBPDP49716 269 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-209ENST00000617930 ZNF83P51522 516 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 UCP3P55916 312 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 TMEM187Q14656 261 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 MST1LQ2TV78 715 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 ZNF880Q6PDB4 577 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 LRP11Q86VZ4 500 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 MRPL24Q96A35 216 aaKnown RBP14.78□□□□□ -0.04
CNOT3-209ENST00000617930 SAT2Q96F10 170 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-209ENST00000617930 ATP23Q9Y6H3 246 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 TRDCB7Z8K6 153 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 H7C2Y5 167 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 K7EPK0 472 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 SLC33A1O00400 549 aaPredicted RBP14.78□□□□□ -0.04
CNOT3-209ENST00000617930 DEGS1O15121 323 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 TFF1P04155 84 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 BMP5P22003 454 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 RPL12P30050 165 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms