RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CBY3A6NI87 242 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 M0R1W7 72 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PRSS3P35030 304 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF56Q15929 161 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR52I1Q8NGK6 324 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 STRAPQ9Y3F4 350 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 DSCAMO60469 2012 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 HEATR5BQ9P2D3 2071 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 A0A087WX48 190 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 C17orf100A8MU93 164 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 J3QT63 122 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SULT1A2P50226 295 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PGGHGQ32M88 737 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 C1orf229Q6ZS94 237 aaPredicted RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 OR8I2Q8N0Y5 310 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SLC26A10Q8NG04 563 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TM2D2Q9BX73 214 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR51J1Q9H342 316 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SLC45A2Q9UMX9 530 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PRSS1P07477 247 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR2T7P0C7T2 308 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 HLA-GP17693 338 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 POU5F2Q8N7G0 328 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 CANT1Q8WVQ1 401 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 C2orf50Q96LR7 162 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 FUZQ9BT04 418 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 WIPI2Q9Y4P8 454 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 UPK2O00526 184 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 CCL3P10147 92 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 RGNQ15493 299 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 MAVSQ7Z434 540 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR8G5Q8NG78 346 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 C20orf27Q9GZN8 174 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PURGQ9UJV8 347 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 MMP16P51512 607 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TEX30Q5JUR7 227 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF843Q8N446 348 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TRGV11A0A075B6L2 103 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TCAPO15273 167 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SLC2A10O95528 541 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 MCHR2Q969V1 340 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 GABARAPL1Q9H0R8 117 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 NXT2Q9NPJ8 142 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 DHRS4L2Q6PKH6 230 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF429Q86V71 674 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SLIRPQ9GZT3 109 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 ICAM5Q9UMF0 924 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 LOC107986453A0A1B0GWG9 222 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 M0R036 132 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PRB1P04280 392 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 RPS26P11Q5JNZ5 115 aaPredicted RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 NPWQ8N729 165 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ACBD4Q8NC06 268 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR5B3Q8NH48 314 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TMEM56-RWDD3S4R434 201 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 A0A087WUJ7 227 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 MGST1P10620 155 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 OMGP23515 440 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 IQCJQ1A5X6 159 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 HIKESHIQ53FT3 197 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR2K2Q8NGT1 345 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TEAD3Q99594 435 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF426Q9BUY5 554 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SAV1Q9H4B6 383 aaPredicted RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 A0A1W2PQM1 296 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ERVFC1-1P60608 527 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 IRF3Q14653 427 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 LAX1Q8IWV1 398 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 OR10V1Q8NGI7 309 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 DMRTA2Q96SC8 542 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PAXXQ9BUH6 204 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TREM2Q9NZC2 230 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF736B4DX44 427 aaPredicted RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 PTP4A3O75365 173 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TRMUO75648 421 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF117Q03924 483 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 RGS21Q2M5E4 152 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF436Q9C0F3 470 aaPredicted RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 SLC25A22Q9H936 323 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PPP1R17O96001 155 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 IGKV1D-33P01593 117 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 IGKV1-33P01594 117 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 TRGC1P0CF51 173 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 WNT4P56705 351 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SLAQ13239 276 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 C3orf36Q3SXR2 165 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 Q6ZSR9 355 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 RNF148Q8N7C7 305 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 EIF5A2Q9GZV4 153 aaKnown RBP2.89□□□□□ -1.95
LPP-220ENST00000617246 PRNDQ9UKY0 176 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 FAM223BA6NKX1 122 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 LALBAP00709 142 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF708P17019 499 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 IGFBP2P18065 325 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 SYPL1Q16563 259 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 PNLIPRP3Q17RR3 467 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 FAM219BQ5XKK7 198 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 DEGS2Q6QHC5 323 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 FAM223AQ8IWN6 122 aa2.89□□□□□ -1.95
LPP-220ENST00000617246 ZNF502Q8TBZ5 544 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms