RNA–Protein interactions for RNA: ENST00000617087.1

PVT1-225, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 130 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-225	ENST00000617087	FBXL3	Q9UKT7	428 aa		3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	NOSIP	Q9Y314	301 aa	Known RBP	3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	ARHGEF28	Q8N1W1	1705 aa	Known RBP	3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	ABCA3	Q99758	1704 aa		3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	TRPM3	Q9HCF6	1732 aa	Predicted RBP	3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	CRYBG1	Q9Y4K1	1723 aa		3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	TULP4	Q9NRJ4	1543 aa		3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	RGS12	O14924	1447 aa		3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	ANKAR	Q7Z5J8	1434 aa		3.18	□□□□□ -1.9
PVT1-225	ENST00000617087	ATP7B	P35670	1465 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	BCL9L	Q86UU0	1499 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	MARF1	Q9Y4F3	1742 aa	Known RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	TRAV8-3	A0A0A6YYJ7	113 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	FAM183A	A6NL82	134 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087		H3BP45	60 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087		J3QLI3	93 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087		K7EPK0	472 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	TOX3	O15405	576 aa	Predicted RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	AQP9	O43315	295 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	SOD3	P08294	240 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	SLC6A1	P30531	599 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	IDH2	P48735	452 aa	Known RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	EIF4EBP2	Q13542	120 aa	Predicted RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	HMGN2P46	Q86SG4	172 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	ITLN2	Q8WWU7	325 aa	Predicted RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	PPP1R36	Q96LQ0	422 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	FAM210A	Q96ND0	272 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	LINC01587	Q99440	93 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	UPF3B	Q9BZI7	483 aa	Known RBP	3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	FAM60A	Q9NP50	221 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	THADA	Q6YHU6	1953 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	SLIT2	O94813	1529 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	ATRN	O75882	1429 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	TNS3	Q68CZ2	1445 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	TOPAZ1	Q8N9V7	1692 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	ALS2	Q96Q42	1657 aa		3.17	□□□□□ -1.9
PVT1-225	ENST00000617087	RGPD8	O14715	1765 aa	Predicted RBP	3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	IGLV2-18	A0A075B6J9	118 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	IGHV3OR16-8	A0A075B7F1	116 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	IZUMO1R	A6ND01	250 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	C16orf90	A8MZG2	172 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087		C9J4A7	227 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087		K7EM74	188 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	MFNG	O00587	321 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	SYNGR1	O43759	233 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	MPZL2	O60487	215 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	UGT2B11	O75310	529 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	RBBP9	O75884	186 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	CDRT1	O95170	752 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	CXorf1	O96002	111 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	ELK4	P28324	431 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	NUDT2	P50583	147 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	STC1	P52823	247 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	UBE2G2	P60604	165 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	C1QTNF8	P60827	252 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	RHOA	P61586	193 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	ZNHIT3	Q15649	155 aa	Predicted RBP	3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	FAM162B	Q5T6X4	162 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	NIPAL1	Q6NVV3	410 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	TBPL2	Q6SJ96	375 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	C16orf47	Q6ZP98	133 aa	Predicted RBP	3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	DGAT2L6	Q6ZPD8	337 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	C10orf107	Q8IVU9	208 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	PPWD1	Q96BP3	646 aa	Known RBP	3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	PEBP4	Q96S96	227 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	FAAP24	Q9BTP7	215 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	C1orf50	Q9BV19	199 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	ZNF436	Q9C0F3	470 aa	Predicted RBP	3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	DHX35	Q9H5Z1	703 aa	Known RBP	3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	WDR54	Q9H977	334 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	HMGXB4	Q9UGU5	601 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	GLI3	P10071	1580 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	RAD50	Q92878	1312 aa		3.16	□□□□□ -1.9
PVT1-225	ENST00000617087	POLR3A	O14802	1390 aa	Predicted RBP	3.15	□□□□□ -1.9
PVT1-225	ENST00000617087	IGHV2-26	A0A0B4J1V2	119 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087		A0A1W2PNU3	283 aa	Predicted RBP	3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	GMNC	A6NCL1	334 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	ZNF98	A6NK75	572 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	ITGB1BP1	O14713	200 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	ENTPD6	O75354	484 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	RAB36	O95755	333 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	TPM4	P67936	248 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	MRPL2	Q5T653	305 aa	Known RBP	3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	TMEM215	Q68D42	235 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	ZIC4	Q8N9L1	334 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	OR2M3	Q8NG83	312 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	DEDD2	Q8WXF8	326 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	FXYD5	Q96DB9	178 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	TMEM56	Q96MV1	263 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	OLFM3	Q96PB7	478 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	ANAPC13	Q9BS18	74 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	RSPO3	Q9BXY4	272 aa	Predicted RBP	3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	HDHD2	Q9H0R4	259 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	C14orf166	Q9Y224	244 aa	Known RBP	3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	NRAP	Q86VF7	1730 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	TRPM1	Q7Z4N2	1603 aa		3.15	□□□□□ -1.91
PVT1-225	ENST00000617087	PLCH1	Q4KWH8	1693 aa		3.14	□□□□□ -1.91
PVT1-225	ENST00000617087	EIF3A	Q14152	1382 aa	Known RBP	3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms