RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 MBPP02686 304 aaPredicted RBP4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 IAPPP10997 89 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 MUC1P15941 1255 aaPredicted RBP4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 MEOX1P50221 254 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 SULT1A2P50226 295 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 FOXG1P55316 489 aaPredicted RBP4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 ERVK-16P61578 105 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 RUNX1Q01196 453 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 TLE1Q04724 770 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 CXorf67Q86X51 503 aaPredicted RBP4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 Q8IYB0 196 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 RAB40CQ96S21 281 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 OR2J1Q9GZK6 312 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 SH3BGRL2Q9UJC5 107 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 CELA3AP09093 270 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 SCTP09683 121 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 TAGLN2P37802 199 aaKnown RBP4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 KCNJ3P48549 501 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 FHITP49789 147 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 PMP22Q01453 160 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 RAB31Q13636 194 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 RBMS3Q6XE24 437 aaKnown RBP4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 POC1AQ8NBT0 407 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 S100PBPQ96BU1 408 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 MOB3AQ96BX8 217 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 RNF126Q9BV68 326 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 DEPPQ9NTK1 212 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 ATPIF1Q9UII2 106 aa4.87□□□□□ -1.63
SYNCRIP-204ENST00000616122 CRYBA1P05813 215 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 SMUG1Q53HV7 270 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PHYHD1Q5SRE7 291 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ENY2Q9NPA8 101 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 POMT1Q9Y6A1 747 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 CFAP54Q96N23 3096 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 IGKV1-12A0A0C4DH73 117 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ZNF98A6NK75 572 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 IGKV1D-12P01611 117 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ARG1P05089 322 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 SP1P08047 785 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 NPBWR1P48145 328 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 BMPERQ8N8U9 685 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ADAMTS17Q8TE56 1095 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 REPIN1Q9BWE0 567 aaKnown RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TMEM222Q9H0R3 208 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PARP11Q9NR21 331 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 OR2W1Q9Y3N9 320 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 MTCL1Q9Y4B5 1905 aaKnown RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 A0A0G2JMM0 328 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 A0A1W2PPB8 328 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 A0A1W2PRS3 328 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 KIR3DP1A8MWS1 328 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 GPR37O15354 613 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 SYNGR1O43759 233 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 S100PP25815 95 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 CFPP27918 469 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 FGF12P61328 243 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ZNF766Q5HY98 468 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PRAMEF5Q5TYX0 476 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PRAMEF6Q5VXH4 476 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 DHRS11Q6UWP2 260 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TBC1D26Q86UD7 250 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 OR10P1Q8NGE3 313 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ERGIC1Q969X5 290 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PINX1Q96BK5 328 aaKnown RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 POM121Q96HA1 1249 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TCEAL7Q9BRU2 100 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 SEC11CQ9BY50 192 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 GFOD1Q9NXC2 390 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 KIAA1456Q9P272 454 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 LRP5LA4QPB2 252 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TUSC2O75896 110 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 MPZP25189 248 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PTGDSP41222 190 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 RAB9AP51151 201 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 SPEM2Q0P670 501 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 IZUMO4Q1ZYL8 232 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 AWAT1Q58HT5 328 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ADGRG7Q96K78 797 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 RTBDNQ9BSG5 229 aaPredicted RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TM2D1Q9BX74 207 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TTTY12Q9BZ98 90 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ESRP2Q9H6T0 727 aaKnown RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 GCM1Q9NP62 436 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 NTN3O00634 580 aaPredicted RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 TSPAN13O95857 204 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 EWSR1Q01844 656 aaKnown RBP eCLIP4.86□□□□□ -1.632e-7■■■■□ 26
SYNCRIP-204ENST00000616122 OR8B8Q15620 311 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 CEACAM21Q3KPI0 293 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 HIST2H3PS2Q5TEC6 136 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 SLC23A3Q6PIS1 610 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ZNF561Q8N587 486 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 GALMQ96C23 342 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 MSL2Q9HCI7 577 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 LIN7CQ9NUP9 197 aaKnown RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 RCC2Q9P258 522 aaKnown RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 FOXD3Q9UJU5 478 aaPredicted RBP4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 ATP23Q9Y6H3 246 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 FAM90A10PA6NDY2 464 aa4.86□□□□□ -1.63
SYNCRIP-204ENST00000616122 FAM90A18PA6NE21 464 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms