RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MCRIP2Q9BUT9 160 aaKnown RBP16.37■□□□□ 0.21
TRAPPC3-208ENST00000616074 IL36GQ9NZH8 169 aa16.37■□□□□ 0.21
TRAPPC3-208ENST00000616074 ING4Q9UNL4 249 aa16.37■□□□□ 0.21
TRAPPC3-208ENST00000616074 RPL36Q9Y3U8 105 aaKnown RBP16.37■□□□□ 0.21
TRAPPC3-208ENST00000616074 LOC100130705A0A1B0GUX0 176 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 C15orf65H3BRN8 121 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 CCRL2O00421 344 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 GEMIN2O14893 280 aaKnown RBP16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 CD2P06729 351 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 FAM53AQ6NSI3 398 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 UBALD1Q8TB05 177 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 TMEM106AQ96A25 262 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 EAF1Q96JC9 268 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 DUX3Q96PT4 197 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 SLC29A1Q99808 456 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 METTL9Q9H1A3 318 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 TENM3Q9P273 2699 aa16.36■□□□□ 0.21
TRAPPC3-208ENST00000616074 TMEM30CPA0ZSE6 113 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 NCBP2LA6PVI3 153 aaKnown RBP16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 GAPDHP04406 335 aaKnown RBP16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 GZMHP20718 246 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 SERPINA2P20848 420 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 ZNF93P35789 620 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 DDI2Q5TDH0 399 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 RPL22L1Q6P5R6 122 aaKnown RBP16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 ZNF695Q8IW36 515 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 IZUMO1Q8IYV9 350 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 Q8N6K4 173 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 OR52N1Q8NH53 320 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 ARL11Q969Q4 196 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 ORAI1Q96D31 301 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 B9D2Q9BPU9 175 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 C9orf16Q9BUW7 83 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 TMEM138Q9NPI0 162 aa16.35■□□□□ 0.21
TRAPPC3-208ENST00000616074 IGHV3-43A0A0B4J1X8 118 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 H0YHG0 523 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 SDCBPO00560 298 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 CSTBP04080 98 aaKnown RBP16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 IGHV3-43DP0DP04 118 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 GPR12P47775 334 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 CCDC58Q4VC31 144 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 KLHL22Q53GT1 634 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 TGIF2LXQ8IUE1 241 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 LINC00311Q8N616 119 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 Q8N9W7 124 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 OR52M1Q8NGK5 317 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 CCDC107Q8WV48 283 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 RAX2Q96IS3 184 aa16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 FGF20Q9NP95 211 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 LIN7CQ9NUP9 197 aaKnown RBP16.34■□□□□ 0.21
TRAPPC3-208ENST00000616074 A0A1W2PP11 408 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 AP4M1O00189 453 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 ETV1P50549 477 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 PPP3R1P63098 170 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 SMN1Q16637 294 aaKnown RBP16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 ATAD3CQ5T2N8 411 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 OR2G6Q5TZ20 316 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 TEX38Q6PEX7 206 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 LCNL1Q6ZST4 164 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 LINC00596Q86U02 117 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 OR2T10Q8NGZ9 312 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 S100A13Q99584 98 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 ABCG5Q9H222 651 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 GFOD1Q9NXC2 390 aa16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 SIRT4Q9Y6E7 314 aaPredicted RBP16.33■□□□□ 0.2
TRAPPC3-208ENST00000616074 WBP4O75554 376 aaKnown RBP16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 RPLP1P05386 114 aaKnown RBP16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 BDKRB2P30411 391 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 MPV17LQ2QL34 196 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 UNQ9370/PRO34162Q6UXP9 181 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 C8orf31Q8N9H6 132 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 TMEM104Q8NE00 496 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 OR13C5Q8NGS8 318 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 RTN4IP1Q8WWV3 396 aaPredicted RBP16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 ST6GALNAC6Q969X2 333 aa16.32■□□□□ 0.2
TRAPPC3-208ENST00000616074 CCL24O00175 119 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 SLC31A2O15432 143 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 ORC5O43913 435 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 RAB25P57735 213 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 DGCR2P98153 550 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 PNLIPRP3Q17RR3 467 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 DEFB136Q30KP8 78 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 SLC22A6Q4U2R8 563 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF497Q6ZNH5 498 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 NEK7Q8TDX7 302 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 SMIM19Q96E16 107 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 RBMXL1Q96E39 390 aaKnown RBP16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF184Q99676 751 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 DCLRE1BQ9H816 532 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 PLSCR3Q9NRY6 295 aa16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 PAK1IP1Q9NWT1 392 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC3-208ENST00000616074 MAGEA13PA6NCF6 341 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF736B4DX44 427 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 AIPO00170 330 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 ZNF780AO75290 641 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 LALBAP00709 142 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 MT-ND4P03905 459 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 VSIG8P0DPA2 414 aa16.3■□□□□ 0.2
TRAPPC3-208ENST00000616074 IGFBP3P17936 291 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms