RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 VSTM2AQ8TAG5 236 aa8.25□□□□□ -1.09
COL12A1-211ENST00000615798 PRSS16Q9NQE7 514 aa8.25□□□□□ -1.09
COL12A1-211ENST00000615798 KCND3Q9UK17 655 aa8.25□□□□□ -1.09
COL12A1-211ENST00000615798 TBL2Q9Y4P3 447 aaKnown RBP8.25□□□□□ -1.09
COL12A1-211ENST00000615798 C1QAP02745 245 aa8.25□□□□□ -1.09
COL12A1-211ENST00000615798 PAPPA-AS1Q5QFB9 102 aa8.25□□□□□ -1.09
COL12A1-211ENST00000615798 WNT5BQ9H1J7 359 aa8.25□□□□□ -1.09
COL12A1-211ENST00000615798 HRO43593 1189 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 PRSS56P0CW18 603 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 C10orf128Q5T292 105 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR1B1Q8NGR6 318 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 PTPMT1Q8WUK0 201 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 NTMQ9P121 344 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 C1SP09871 688 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 CKS2P33552 79 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 KIR3DL2P43630 455 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 ATXN8Q156A1 80 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR2V1Q8NHB1 315 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 TRAV5A0A0B4J249 113 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 TMEM250H0YL14 139 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 FRS3O43559 492 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 SLC19A1P41440 591 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 CT83Q5H943 113 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 THSD4Q6ZMP0 1018 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR4X1Q8NH49 305 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 ATP6V0BQ99437 205 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 UPK1AO00322 258 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 TNFSF15O95150 251 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 GPR183P32249 361 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 CDKN2AP42771 156 aaKnown RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 ZNF137PP52743 207 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 PGGT1BP53609 377 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 PRKNO60260 465 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 ZBTB25P24278 435 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 TBC1D28Q2M2D7 210 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 C9orf135Q5VTT2 229 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 SFT2D2O95562 160 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 IGHV4-39P01824 125 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 FGF9P31371 208 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 PCBP3P57721 371 aaKnown RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR51E1Q8TCB6 317 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 MS4A6AQ9H2W1 248 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 A0A1W2PQU0 124 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 SLC17A2O00624 439 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 SBK3P0C264 359 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 CCSMST1Q4G0I0 132 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR10AC1Q8NH08 325 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 MRGPRX1Q96LB2 322 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 C3orf80F5H4A9 247 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR3A4PP47883 348 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 TMEM255AQ5JRV8 349 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 SLC48A1Q6P1K1 146 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 CLEC2AQ6UVW9 174 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 TMEM207Q6UWW9 146 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 MUC20Q8N307 709 aaPredicted RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 ST6GAL2Q96JF0 529 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 DERL3Q96Q80 235 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 OR10J3Q5JRS4 329 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 MRPL2Q5T653 305 aaKnown RBP8.24□□□□□ -1.09
COL12A1-211ENST00000615798 FAAP20Q6NZ36 180 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 C2orf88Q9BSF0 95 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 LAMTOR2Q9Y2Q5 125 aa8.24□□□□□ -1.09
COL12A1-211ENST00000615798 CTXND1A0A1B0GTU2 59 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RBMY1BA6NDE4 496 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RBMY1EA6NEQ0 496 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RBMY1DP0C7P1 496 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RBMY1A1P0DJD3 496 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RBMY1CP0DJD4 496 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 P2RY4P51582 365 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 HIST1H1AQ02539 215 aaPredicted RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 ZNF441Q8N8Z8 693 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 MRPL43Q8N983 215 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 LRRC75AQ8NAA5 344 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 PPIL1Q9Y3C6 166 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 SPTAN1Q13813 2472 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 PTPRZ1P23471 2315 aaPredicted RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 TIMP1P01033 207 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 SYT14P1Q58G82 188 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 CD300LDQ6UXZ3 194 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 SLC39A5Q6ZMH5 540 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 NRSN2Q9GZP1 204 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 PRSS21Q9Y6M0 314 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 LOC107986453A0A1B0GWG9 222 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 TNFRSF4P43489 277 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 PAX2Q02962 417 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 HSD11B1LQ7Z5J1 315 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 ATOH1Q92858 354 aaPredicted RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 PEX11GQ96HA9 241 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 ZNF542PQ5EBM4 170 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 BCAT2O15382 392 aaPredicted RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 GLI4P10075 376 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 PMELP40967 661 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RGRP47804 291 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 TNFSF10P50591 281 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 RPS20P60866 119 aaKnown RBP8.23□□□□□ -1.09
COL12A1-211ENST00000615798 FABP5Q01469 135 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 TMEM25Q86YD3 366 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 J3KRW8 73 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 ETHE1O95571 254 aa8.23□□□□□ -1.09
COL12A1-211ENST00000615798 CYB561D1Q8N8Q1 229 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms