RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 NSUN5P2Q63ZY6 315 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF660Q6AZW8 331 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 CPEB3Q8NE35 698 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 NPDC1Q9NQX5 325 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 CLN8Q9UBY8 286 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PPH5 198 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF727A8MUV8 499 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 J3QT63 122 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 DEDDO75618 318 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 KLF7O75840 302 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 SURF2Q15527 256 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 C1orf185Q5T7R7 199 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 VWA1Q6PCB0 445 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 C17orf82Q86X59 251 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 TVP23CQ96ET8 276 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 LRFN3Q9BTN0 628 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 SH3BGRL3Q9H299 93 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 FGF12P61328 243 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 IZUMO4Q1ZYL8 232 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 LRRC10Q5BKY1 277 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 SLC25A53Q5H9E4 307 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 STUMQ69YW2 141 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 SIGIRRQ6IA17 410 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 UQCC3Q6UW78 93 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 NTNG2Q96CW9 530 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 ATP5SQ99766 215 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 RSRP1Q9BUV0 290 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 RNF122Q9H9V4 155 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 TOX4O94842 621 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 MBPP02686 304 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 CD74P04233 296 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 COX7A1P24310 79 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 CD82P27701 267 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF818PQ6ZRF7 136 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 LEAP2Q969E1 77 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 SHARPINQ9H0F6 387 aa7.69□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1B0GTI1 187 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 CRYM-AS1A6NIL9 109 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 H0YL77 283 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 DVL1P1P54792 670 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 C1orf87Q8N0U7 546 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 ABHD14BQ96IU4 210 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 NDRG3Q9UGV2 375 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 RHBDL1O75783 438 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 SCGB1D1O95968 90 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 CYB5R3P00387 301 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 OR5G3P0C626 314 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 BATFQ16520 125 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF528Q3MIS6 628 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 FAM214BQ7L5A3 538 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 CLRN3Q8NCR9 226 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 SLC35E1Q96K37 410 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF106Q9H2Y7 1883 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 WNT9BO14905 357 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 LOXL4Q96JB6 756 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 ABCA7Q8IZY2 2146 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 REG1BP48304 166 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 RUNX1Q01196 453 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 INO80CQ6PI98 192 aaPredicted RBP7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 EDARADDQ8WWZ3 215 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 ISOC2Q96AB3 205 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 MISP3Q96FF7 219 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 SMIM7Q9BQ49 75 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 MRPL13Q9BYD1 178 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 DOK5Q9P104 306 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 RCC2Q9P258 522 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 hCG_1809904A0A1W2PP81 198 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PR64 198 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 A0A1W2PRV1 198 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 MFSD2BA6NFX1 497 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 TRIM77I1YAP6 450 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 WDFY1Q8IWB7 410 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 OR13D1Q8NGV5 346 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 OR1L1Q8NH94 360 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 PHYHIPLQ96FC7 376 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 LRRK1Q38SD2 2015 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 CEP290O15078 2479 aa7.68□□□□□ -1.18
PDLIM5-222ENST00000615540 OR7C2O60412 319 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 PRF1P14222 555 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 COX5AP20674 150 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 ZFP36L1Q07352 338 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 SRSF6Q13247 344 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 TMEM108Q6UXF1 575 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CALHM1Q8IU99 346 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 SELENOHQ8IZQ5 122 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 OR4A4PQ8NGN8 299 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 FGF11Q92914 225 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 UQCC1Q9NVA1 299 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 LGALS4P56470 323 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 COMMD5Q9GZQ3 224 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 URB1O60287 2271 aaKnown RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 CELSR3Q9NYQ7 3312 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 COL4A4P53420 1690 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 E9PQ18 207 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 MFNGO00587 321 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 GALR2O43603 387 aaPredicted RBP7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 ZNF737O75373 536 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 SCGB2A1O75556 95 aa7.67□□□□□ -1.18
PDLIM5-222ENST00000615540 ARG1P05089 322 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms