RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 PYDC2Q56P42 97 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 GPX8Q8TED1 209 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 GCDHQ92947 438 aaPredicted RBP12.11□□□□□ -0.47
CD48-203ENST00000613788 DACT3Q96B18 629 aaPredicted RBP12.11□□□□□ -0.47
CD48-203ENST00000613788 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 ONECUT1Q9UBC0 465 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 INSIG2Q9Y5U4 225 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 KBTBD11-OT1A0A1B0GTJ5 212 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 MEX3AA1L020 520 aaKnown RBP12.11□□□□□ -0.47
CD48-203ENST00000613788 MEIOCA2RUB1 952 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 M0R1W7 72 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 SPINT2O43291 252 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 RBBP9O75884 186 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 CGB3P0DN86 165 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 CGB7P0DN87 165 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 KIR2DS4P43632 304 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 DVL1P1P54792 670 aaPredicted RBP12.11□□□□□ -0.47
CD48-203ENST00000613788 KIR2DS1Q14954 304 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 DCAF12L2Q5VW00 463 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 C1orf122Q6ZSJ8 110 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 TCF23Q7RTU1 214 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 KIR3DL3Q8N743 410 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 ARL11Q969Q4 196 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 TAF9BQ9HBM6 251 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 ZNF286AQ9HBT8 521 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 HIF1ANQ9NWT6 349 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 ZNF230Q9UIE0 474 aaPredicted RBP12.11□□□□□ -0.47
CD48-203ENST00000613788 KPTNQ9Y664 436 aa12.11□□□□□ -0.47
CD48-203ENST00000613788 DOCK11Q5JSL3 2073 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 TRDCB7Z8K6 153 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
CD48-203ENST00000613788 CCL3L1P16619 93 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 ARF6P62330 175 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 C17orf58Q2M2W7 97 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 Q6ZS49 121 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 HOGA1Q86XE5 327 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 OR52I2Q8NH67 350 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 SMIM4Q8WVI0 70 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 AKIP1Q9NQ31 210 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 CALYQ9NYX4 217 aa12.1□□□□□ -0.47
CD48-203ENST00000613788 MEIS3P1A6NDR6 274 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 C17orf98A8MV24 154 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 NPIPB11E5RHQ5 1161 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 RBP4P02753 201 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 SSTR5P35346 364 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 DLX6P56179 175 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 ACTBP60709 375 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 ACTG1P63261 375 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 HLA-DRB3P79483 266 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 SSBP1Q04837 148 aaKnown RBP12.09□□□□□ -0.47
CD48-203ENST00000613788 PAX8Q06710 450 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 HMGN3Q15651 99 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 ZNF79Q15937 498 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 RNASE12Q5GAN4 147 aaKnown RBP12.09□□□□□ -0.47
CD48-203ENST00000613788 METTL11BQ5VVY1 283 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 Q6ZPA2 131 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 Q8N402 240 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 PRR18Q8N4B5 295 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 GVQW1Q8N7I0 195 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 GDPD1Q8N9F7 314 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 BEST4Q8NFU0 473 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 OR10A7Q8NGE5 316 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 MAFIPQ8WZ33 124 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 GALMQ96C23 342 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 LINC00574Q9H8X3 128 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
CD48-203ENST00000613788 SETXQ7Z333 2677 aaKnown RBP12.09□□□□□ -0.47
CD48-203ENST00000613788 C15orf65H3BRN8 121 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 J3QLI3 93 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 HBZP02008 142 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 INHBBP09529 407 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 CD99P14209 185 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 FOSL1P15407 271 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 RCVRNP35243 200 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 DGCR2P98153 550 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 LSAMPQ13449 338 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 OR52W1Q6IF63 320 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 FAHD2BQ6P2I3 314 aaPredicted RBP12.08□□□□□ -0.48
CD48-203ENST00000613788 HEPN1Q6WQI6 88 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 MFSD4AQ8N468 514 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 OR4A4PQ8NGN8 299 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 RFESDQ8TAC1 157 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 FAHD2AQ96GK7 314 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 THAP7Q9BT49 309 aaPredicted RBP12.08□□□□□ -0.48
CD48-203ENST00000613788 WDR12Q9GZL7 423 aaKnown RBP12.08□□□□□ -0.48
CD48-203ENST00000613788 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 METTL8Q9H825 291 aaKnown RBP12.08□□□□□ -0.48
CD48-203ENST00000613788 IDI2-AS1Q9NZ38 188 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 KLK11Q9UBX7 282 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
CD48-203ENST00000613788 MYO9AB2RTY4 2548 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 FABP7O15540 132 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 TOX4O94842 621 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CD48-203ENST00000613788 ZNF16P17020 682 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms