RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 TDGF1P13385 188 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CEACAM1P13688 526 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 INSL4Q14641 139 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 DMRTC2Q8IXT2 367 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CXorf36Q9H7Y0 433 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SIGLEC7Q9Y286 467 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 HIVEP2P31629 2446 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SERTM1A2A2V5 107 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 KBTBD11O94819 623 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CXorf1O96002 111 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR4A8P0C604 315 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 AZU1P20160 251 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RRADP55042 308 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RPL7P18124 248 aaKnown RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 DLX2Q07687 328 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 COL9A2Q14055 689 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MS4A6AQ9H2W1 248 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR1D5P58170 312 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 C20orf196Q8IYI0 205 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR10G3Q8NGC4 313 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 FLRT3Q9NZU0 649 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 NOTCH3Q9UM47 2321 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 FANCMQ8IYD8 2048 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 GPR3P46089 330 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 PCBP3P57721 371 aaKnown RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MLF2Q15773 248 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 GCSAMLQ5JQS6 135 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 FADS6Q8N9I5 356 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 CLDND1Q9NY35 253 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SPINT1O43278 529 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 TIMP2P16035 220 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MFAP4P55083 255 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 ZBTB34Q8NCN2 500 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 LOC102725191A0A1B0GVB3 256 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SDCBPO00560 298 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 GZMMP51124 257 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RHOBP62745 196 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 DEFB128Q7Z7B8 93 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR52E1Q8NGJ3 308 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR1N2Q8NGR9 330 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 NEUROG1Q92886 237 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 SLC2A8Q9NY64 477 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 RLFQ13129 1914 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 IGHV2-70DA0A0C4DH43 119 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 NPIPB15A6NHN6 443 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 C3orf80F5H4A9 247 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 M0QZ24 198 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MPPED1O15442 326 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR1C1Q15619 314 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MGST2Q99735 147 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 NUP210LQ5VU65 1888 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 KCPQ6ZWJ8 1503 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 MED19A0JLT2 244 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-213ENST00000613099 PTGER4P35408 488 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 HOGA1Q86XE5 327 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR2M3Q8NG83 312 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 OR10G6Q8NH81 332 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 DDIT4LQ96D03 193 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 YAE1D1Q9NRH1 226 aa4.38□□□□□ -1.71
VPS13D-213ENST00000613099 H3BUT2 72 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 IFNL4K9M1U5 179 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PAQR9Q6ZVX9 377 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 ST6GALNAC3Q8NDV1 305 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OR2Z1Q8NG97 314 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PTPRDP23468 1912 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 RPS11P62280 158 aaKnown RBP eCLIP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 YPEL5P62699 121 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 CCL25O15444 150 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SRP19P09132 144 aaKnown RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 DYNLT3P51808 116 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OR2M7Q8NG81 312 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 NRN1Q9NPD7 142 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 WBP1LQ9NX94 342 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 UBE2L5PA0A1B0GUS4 154 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 ZC3H12DA2A288 527 aaKnown RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SNURFLB1AK76 121 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 CEACAM6P40199 344 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PPP2CBP62714 309 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PPP2CAP67775 309 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SCCPDHQ8NBX0 429 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 KCNS1Q96KK3 526 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 LPAR4Q99677 370 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 IL17CQ9P0M4 197 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 IL4P05112 153 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 FGF8P55075 233 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 LRRC10Q5BKY1 277 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 FBXW9Q5XUX1 488 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 CLDN23Q96B33 292 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PDLIM7Q9NR12 457 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SCN1AP35498 2009 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0D9SEW6 157 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 LOC107986453A0A1B0GWG9 222 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 ATP6V0CP27449 155 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TP53INP2Q8IXH6 220 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 POLEQ07864 2286 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 RABIFP47224 123 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms