RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FAM86C1Q9NVL1 165 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 OR14J1Q9UGF5 321 aa11.96□□□□□ -0.49
PCDHGA3-202ENST00000612467 WNT9BO14905 357 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 DEGS1O15121 323 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 SMPD2O60906 423 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 UBAC2Q8NBM4 344 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PLSCR2Q9NRY7 297 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 GLRX2Q9NS18 164 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 POMT1Q9Y6A1 747 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PGLYRP1O75594 196 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 TUSC2O75896 110 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PRH1P02810 166 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 GAPDHP04406 335 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PSG2P11465 335 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF14P17017 642 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PPP1CBP62140 327 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 FOXF2Q12947 444 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 MPV17LQ2QL34 196 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 IL34Q6ZMJ4 242 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 SAT2Q96F10 170 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 C20orf24Q9BUV8 137 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 TINAGQ9UJW2 476 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PPP1R3CQ9UQK1 317 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 TMED3Q9Y3Q3 217 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF292O60281 2723 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 CDRT15L2A8MXV6 281 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PPP1CCP36873 323 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 RUNX1Q01196 453 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF154Q13106 437 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 Q6P435 159 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF573Q86YE8 665 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 SAXO1Q8IYX7 474 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR2C3Q8N628 320 aa11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 PURGQ9UJV8 347 aaKnown RBP11.95□□□□□ -0.5
PCDHGA3-202ENST00000612467 USF3Q68DE3 2245 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR2H2O95918 312 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF16P17020 682 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 CAMLGP49069 296 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF324BQ6AW86 544 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR1J1Q8NGS3 322 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 CARHSP1Q9Y2V2 147 aaKnown RBP11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 ZNF175Q9Y473 711 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A10PA6NDY2 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A18PA6NE21 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A16PA6NEW6 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A20PA6NIJ5 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A8PA6NJQ4 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A7PA6NKC0 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A12PA8MX19 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A5PA8MXJ8 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A23PA8MXZ1 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM157AC9JC47 383 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 GPR37O15354 613 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 CDS2O95674 445 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A15PP0C7V4 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A13PP0C7W8 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A14PP0C7W9 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM90A24PP0C7X0 464 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 P2RY1P47900 373 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 EIF5AP63241 154 aaKnown RBP11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 PSG7Q13046 419 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 GNMTQ14749 295 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 TBC1D28Q2M2D7 210 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 EIF5AL1Q6IS14 154 aaKnown RBP11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 Q6ZRM9 215 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 TMEM56Q96MV1 263 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 C11orf1Q9H5F2 150 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 PARP11Q9NR21 331 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 MPC1Q9Y5U8 109 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 TMEM56-RWDD3S4R434 201 aa11.94□□□□□ -0.5
PCDHGA3-202ENST00000612467 TSPAN15O95858 294 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 CD5P06127 495 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 DAOP14920 347 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 UBE2NP61088 152 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 OR10J5Q8NHC4 309 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 FAM213BQ8TBF2 198 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 DMXL2Q8TDJ6 3036 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 TAAR3PQ9P1P4 343 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 FBXO7Q9Y3I1 522 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 DOCK11Q5JSL3 2073 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 KIR2DS1A0A191URI9 304 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 CHST1O43916 411 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 EIF3GO75821 320 aaKnown RBP eCLIP11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 IGLV2-14P01704 120 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 FTH1P19P0C7X4 201 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 SPP1P10451 314 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 PMELP40967 661 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 RPL35P42766 123 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 KIR2DS4P43632 304 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 F2RL1P55085 397 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 CCL20P78556 96 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 HLA-DRB3P79483 266 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 IL24Q13007 206 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 IL13RA2Q14627 380 aa11.93□□□□□ -0.5
PCDHGA3-202ENST00000612467 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 183 ms