RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ATP5SQ99766 215 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 GPR87Q9BY21 358 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 FAM117AQ9C073 453 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 CARHSP1Q9Y2V2 147 aaKnown RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 DOCK7Q96N67 2140 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 TMEM30CPA0ZSE6 113 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 J3QT63 122 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 PSG2P11465 335 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 RAB5AP20339 215 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 OR3A1P47881 315 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 HLA-DRB3P79483 266 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 SRSF4Q08170 494 aaKnown RBP7.49□□□□□ -1.21
LIG4-204ENST00000611712 CLEC12BQ2HXU8 276 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 PRAMEF5Q5TYX0 476 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 PRAMEF6Q5VXH4 476 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 NECAP1Q8NC96 275 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 NABP1Q96AH0 204 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 GALNT14Q96FL9 552 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 DMRTA2Q96SC8 542 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 IFT22Q9H7X7 185 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 PRDM6Q9NQX0 595 aa7.49□□□□□ -1.21
LIG4-204ENST00000611712 SPTBN2O15020 2390 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 TRBV6-7A0A0A0MS04 114 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 E9PLN8 166 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 H7BYZ3 331 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 HEXAP06865 529 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 DANCRP0C864 163 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 RD3LP0DJH9 198 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 F2RP25116 425 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 NOVA1P51513 510 aaKnown RBP7.48□□□□□ -1.21
LIG4-204ENST00000611712 H3F3AP84243 136 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 CDCP2Q5VXM1 449 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 DHRS7BQ6IAN0 325 aaPredicted RBP7.48□□□□□ -1.21
LIG4-204ENST00000611712 SMIM8Q96KF7 97 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 FZR1Q9UM11 496 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 ZNF718Q3SXZ3 478 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 RNF212Q495C1 297 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 MDP1Q86V88 176 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 BMPERQ8N8U9 685 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 OR4A4PQ8NGN8 299 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 OR4F5Q8NH21 305 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 OR4F4Q96R69 305 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 ARV1Q9H2C2 271 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 CYTL1Q9NRR1 136 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 WIPF3A6NGB9 483 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 VSTM5A8MXK1 200 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 H3BQ15 152 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 SNCAP37840 140 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 GPR12P47775 334 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 UCP3P55916 312 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 SLC38A11Q08AI6 406 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 HIPK2Q9H2X6 1198 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 Q9N2K0 584 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 ICE1Q9Y2F5 2266 aa7.48□□□□□ -1.21
LIG4-204ENST00000611712 MAP1LC3B2A6NCE7 125 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 SHISA7A6NL88 538 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 DEFB108AA8MXU0 73 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 PITX3O75364 302 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 CELA3AP09093 270 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 MDH2P40926 338 aaKnown RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 PMELP40967 661 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 ZXDAP98168 799 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 HIST3H3Q16695 136 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FBXW9Q5XUX1 488 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 ZNF818PQ6ZRF7 136 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 LINC00518Q8N0U6 118 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 MAP1LC3BQ9GZQ8 125 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 OR2D2Q9H210 308 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 PLEKHA3Q9HB20 300 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 GCM1Q9NP62 436 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 RAB9BQ9NP90 201 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FOXD3Q9UJU5 478 aaPredicted RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 TINAGQ9UJW2 476 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 BRCA2P51587 3418 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A10PA6NDY2 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A18PA6NE21 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A16PA6NEW6 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A20PA6NIJ5 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A8PA6NJQ4 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A7PA6NKC0 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 ZNF705GA8MUZ8 300 aaPredicted RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A22PA8MWA6 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A12PA8MX19 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A5PA8MXJ8 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A23PA8MXZ1 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 C21orf140B9A014 251 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A15PP0C7V4 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A13PP0C7W8 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A14PP0C7W9 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FAM90A24PP0C7X0 464 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 COX5AP20674 150 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 FGF7P21781 194 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 CD200P41217 278 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 IZUMO4Q1ZYL8 232 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
LIG4-204ENST00000611712 FGFBP3Q8TAT2 258 aa7.47□□□□□ -1.21
LIG4-204ENST00000611712 PINX1Q96BK5 328 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms