RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 ZFP41Q8N8Y5 198 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 OR10A7Q8NGE5 316 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 OR10X1Q8NGY0 326 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 ARL11Q969Q4 196 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 RCC1LQ96I51 464 aaKnown RBP12.66□□□□□ -0.38
SGMS1-209ENST00000609445 ZNF184Q99676 751 aaPredicted RBP12.66□□□□□ -0.38
SGMS1-209ENST00000609445 IFT22Q9H7X7 185 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 BABAM2Q9NXR7 383 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 ZNF281Q9Y2X9 895 aa12.66□□□□□ -0.38
SGMS1-209ENST00000609445 TRAV8-7A0A075B6U6 113 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 IGHV3-43A0A0B4J1X8 118 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 SERPINE3A8MV23 424 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 C15orf65H3BRN8 121 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 IGHV3-43DP0DP04 118 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 IGFBP3P17936 291 aaPredicted RBP12.65□□□□□ -0.38
SGMS1-209ENST00000609445 HOXD3P31249 432 aaPredicted RBP12.65□□□□□ -0.38
SGMS1-209ENST00000609445 RIPK1Q13546 671 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 SLC22A6Q4U2R8 563 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 SLC16A12Q6ZSM3 486 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 LINC00482Q8N8I6 264 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 S100A13Q99584 98 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 DIMT1Q9UNQ2 313 aaKnown RBP12.65□□□□□ -0.38
SGMS1-209ENST00000609445 COL7A1Q02388 2944 aa12.65□□□□□ -0.38
SGMS1-209ENST00000609445 IGHV1-3A0A0C4DH29 117 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 TRBV5-5A0A0J9YX44 114 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 WI2-2373I1.2A0A1W2PRP0 233 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 LINC01548A6NM66 108 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 CCRL2O00421 344 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 FGF16O43320 207 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 GZMHP20718 246 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 RPS11P62280 158 aaKnown RBP eCLIP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 RPL23AP62750 156 aaKnown RBP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 LRRC36Q1X8D7 754 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 DMKNQ6E0U4 476 aaPredicted RBP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 OR2W3Q7Z3T1 314 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 MRPL41Q8IXM3 137 aaKnown RBP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 NEK7Q8TDX7 302 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 CHPT1Q8WUD6 406 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 GHSRQ92847 366 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 RBMXL1Q96E39 390 aaKnown RBP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 CYYR1Q96J86 154 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 RDH12Q96NR8 316 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 GFOD1Q9NXC2 390 aa12.64□□□□□ -0.39
SGMS1-209ENST00000609445 EXOSC1Q9Y3B2 195 aaKnown RBP12.64□□□□□ -0.39
SGMS1-209ENST00000609445 PNMA8CA0A1B0GUJ8 204 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 A0A1W2PPK0 400 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 SDCBPO00560 298 aaPredicted RBP12.63□□□□□ -0.39
SGMS1-209ENST00000609445 SLC31A2O15432 143 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 IGHG2P01859 326 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 MT-ND4P03905 459 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 GAPDHP04406 335 aaKnown RBP12.63□□□□□ -0.39
SGMS1-209ENST00000609445 MYL12AP19105 171 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 MPV17LQ2QL34 196 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 Q499Y3 187 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 ZNF497Q6ZNH5 498 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 C8orf86Q6ZUL3 223 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 SLC35E3Q7Z769 313 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 LINC00596Q86U02 117 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 ZNF485Q8NCK3 441 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 MUL1Q969V5 352 aa12.63□□□□□ -0.39
SGMS1-209ENST00000609445 EAF1Q96JC9 268 aaPredicted RBP12.63□□□□□ -0.39
SGMS1-209ENST00000609445 PAK1IP1Q9NWT1 392 aaPredicted RBP12.63□□□□□ -0.39
SGMS1-209ENST00000609445 IRGMA1A4Y4 181 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 NUDT19A8MXV4 375 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 AIPO00170 330 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 GPX5O75715 221 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 GTF2F2P13984 249 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 THBS3P49746 956 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 EBI3Q14213 229 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 LINC00311Q8N616 119 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 Q8N6K4 173 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 OR52M1Q8NGK5 317 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 OR4K15Q8NH41 348 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 GGHQ92820 318 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 TMEM80Q96HE8 168 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 PGLYRP3Q96LB9 341 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 OR14A2Q96R54 314 aa12.62□□□□□ -0.39
SGMS1-209ENST00000609445 MRPS28Q9Y2Q9 187 aaKnown RBP12.62□□□□□ -0.39
SGMS1-209ENST00000609445 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 NCBP2LA6PVI3 153 aaKnown RBP12.61□□□□□ -0.39
SGMS1-209ENST00000609445 ZNF736B4DX44 427 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-209ENST00000609445 ORC5O43913 435 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 ZNF780AO75290 641 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-209ENST00000609445 DUS4LO95620 317 aaKnown RBP12.61□□□□□ -0.39
SGMS1-209ENST00000609445 DOC2BQ14184 412 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 DEFB121Q5J5C9 76 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 GLIPR1L1Q6UWM5 242 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 IZUMO1Q8IYV9 350 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 STPG2Q8N412 459 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 JAGN1Q8N5M9 183 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 KLHL30-AS1Q8NEE0 82 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 OR51D1Q8NGF3 324 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 RTN4IP1Q8WWV3 396 aaPredicted RBP12.61□□□□□ -0.39
SGMS1-209ENST00000609445 ST6GALNAC6Q969X2 333 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
SGMS1-209ENST00000609445 BANF2Q9H503 90 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms